Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 AC011933.2-201ENST00000578539 2790 ntBASIC5.74□□□□□ -1.49
VPS33AQ96AX1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS33AQ96AX1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC068870.3-201ENST00000625077 2536 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 MAPK10-338ENST00000641647 3362 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 OR10R3P-201ENST00000361688 942 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 RNA5SP453-201ENST00000362503 119 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 RNU105B-201ENST00000364478 208 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 RNA5SP77-201ENST00000365394 120 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 SNORD94-201ENST00000386037 137 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 YWHAZP4-201ENST00000392459 708 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AL360013.1-201ENST00000419031 858 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 FTLP19-201ENST00000433300 394 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 BUD31P2-201ENST00000449374 300 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 SDC4P-201ENST00000453285 601 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AL034369.1-201ENST00000453808 477 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC107015.1-201ENST00000466902 747 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AP003385.3-201ENST00000472498 287 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 RN7SL267P-201ENST00000485107 261 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 TXNP4-201ENST00000575018 310 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 MIR6811-201ENST00000620409 58 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC130304.1-201ENST00000622942 2385 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC022325.1-201ENST00000502748 2199 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS33AQ96AX1 AC006484.1-201ENST00000435086 1884 ntBASIC5.73□□□□□ -1.49
VPS33AQ96AX1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC022306.1-201ENST00000560489 1562 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 THAP12P9-201ENST00000503971 2360 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 RN7SKP81-201ENST00000365603 331 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 SNORD65-201ENST00000391079 73 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 MYL6P5-201ENST00000412707 459 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AL096829.1-201ENST00000413677 457 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 MTND4LP13-201ENST00000425022 298 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 RPSAP40-201ENST00000442343 891 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 NDUFA5P8-201ENST00000449019 346 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 RN7SL836P-201ENST00000476140 296 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC114324.2-202ENST00000503812 134 ntBASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS33AQ96AX1 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms