Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 OR2L9P-201ENST00000444456 913 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 POU5F1P5-201ENST00000445059 658 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC022431.1-201ENST00000450941 438 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC002553.2-201ENST00000453217 340 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC099670.1-201ENST00000455141 783 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 GM2AP2-201ENST00000491764 562 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 TOMM22P4-201ENST00000511318 336 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC022826.1-201ENST00000519383 805 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC136777.2-201ENST00000522979 358 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 CYCSP25-201ENST00000525280 316 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 NPM1P42-201ENST00000560329 862 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC011891.2-201ENST00000604949 397 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.48□□□□□ -1.53
PTP4A1Q93096 AC016583.1-201ENST00000624221 2431 ntBASIC5.48□□□□□ -1.53
PTP4A1Q93096 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTP4A1Q93096 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTP4A1Q93096 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTP4A1Q93096 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTP4A1Q93096 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTP4A1Q93096 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTP4A1Q93096 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTP4A1Q93096 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 MIR191-201ENST00000384873 92 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC003045.1-201ENST00000398779 713 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC112492.2-201ENST00000432774 1030 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 VN1R48P-201ENST00000448149 1036 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 RN7SL39P-201ENST00000462264 297 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC021205.1-201ENST00000468797 348 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 RPL23AP40-201ENST00000487630 390 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC117500.1-201ENST00000497352 755 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 SNORA74.1-201ENST00000516320 180 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 RNA5SP206-201ENST00000516703 121 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 Y_RNA.710-201ENST00000516975 110 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AP002373.2-201ENST00000541631 1060 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AP001357.1-201ENST00000586304 1053 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC063977.7-201ENST00000594454 337 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC008555.7-201ENST00000605008 583 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC084036.1-201ENST00000609190 508 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC022106.1-201ENST00000612834 766 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 MIR6811-201ENST00000620409 58 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC089999.3-201ENST00000622440 577 ntBASIC5.47□□□□□ -1.53
PTP4A1Q93096 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTP4A1Q93096 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTP4A1Q93096 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms