Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 Vault.2-201ENST00000516519 98 ntBASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 AC135983.3-201ENST00000528049 1226 ntBASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 AC002310.3-201ENST00000569728 723 ntBASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 AC063977.7-201ENST00000594454 337 ntBASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 OR51C1P-201ENST00000608504 942 ntBASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC112Q8NEF3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC125336.1-201ENST00000508893 2827 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 U3.7-201ENST00000363668 216 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 RBBP4P5-201ENST00000398583 1266 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 MIR1282-201ENST00000408865 101 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 HYALP1-201ENST00000417674 1279 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 RPL35AP31-201ENST00000418340 337 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC117434.1-201ENST00000419971 836 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC099782.1-201ENST00000425889 474 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC108479.1-201ENST00000431142 427 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AL354893.1-201ENST00000433735 348 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 RN7SL39P-201ENST00000462264 297 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC104339.1-201ENST00000465478 348 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 H3F3AP5-201ENST00000475267 429 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 EIF3LP3-201ENST00000495197 822 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC021146.10-201ENST00000515628 706 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC008507.3-201ENST00000585753 472 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC079315.1-201ENST00000602952 623 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AL645933.2-201ENST00000606743 1207 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 MIR6071-201ENST00000616741 78 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 MIR6861-201ENST00000618657 64 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 AC021766.1-201ENST00000624404 741 ntBASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC112Q8NEF3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 LINC02019-201ENST00000608605 2060 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL133482.1-201ENST00000415988 498 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL359265.1-201ENST00000440296 795 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC015983.1-201ENST00000441577 373 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 RPS7P3-201ENST00000443360 580 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 MEMO1P4-201ENST00000453590 386 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC021006.1-201ENST00000489849 553 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 OR4A17P-201ENST00000526032 904 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms