Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 RPL34P27-201ENST00000428810 349 ntBASIC8.74□□□□□ -1.01
VPS8Q8N3P4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 SNORD125-201ENST00000459538 96 ntBASIC8.74□□□□□ -1.01
VPS8Q8N3P4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 CDC42EP3P1-201ENST00000601004 764 ntBASIC8.74□□□□□ -1.01
VPS8Q8N3P4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.74□□□□□ -1.01
VPS8Q8N3P4 AC132068.1-201ENST00000623805 459 ntBASIC8.74□□□□□ -1.01
VPS8Q8N3P4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
VPS8Q8N3P4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 RNA5SP335-201ENST00000363817 110 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 SNORA16A-201ENST00000384342 137 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AL133445.1-201ENST00000467051 452 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 SIAH1P1-201ENST00000479411 923 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AC090638.1-201ENST00000498296 909 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 SCARNA21.2-201ENST00000516600 166 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 OR5AM1P-201ENST00000532136 1032 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AP000864.1-201ENST00000609424 650 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 AL162456.1-201ENST00000634535 2006 ntBASIC8.73□□□□□ -1.01
VPS8Q8N3P4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.73□□□□□ -1.01
VPS8Q8N3P4 OR4F13P-202ENST00000560066 2054 ntBASIC8.72□□□□□ -1.01
VPS8Q8N3P4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 RNU6-171P-201ENST00000384354 107 ntBASIC8.72□□□□□ -1.01
VPS8Q8N3P4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 CYCSP12-201ENST00000437729 300 ntBASIC8.72□□□□□ -1.01
VPS8Q8N3P4 RN7SL177P-201ENST00000476596 299 ntBASIC8.72□□□□□ -1.01
VPS8Q8N3P4 AC122688.1-201ENST00000541494 223 ntBASIC8.72□□□□□ -1.01
VPS8Q8N3P4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 AC126177.5-201ENST00000549599 178 ntBASIC8.72□□□□□ -1.01
VPS8Q8N3P4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 AL359513.1-201ENST00000614364 557 ntBASIC8.72□□□□□ -1.01
VPS8Q8N3P4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 CASC19-248ENST00000641674 1356 ntBASIC8.72□□□□□ -1.01
VPS8Q8N3P4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VPS8Q8N3P4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 SPRYD7P1-201ENST00000443861 570 ntBASIC8.71□□□□□ -1.01
VPS8Q8N3P4 AZGP1P2-201ENST00000454506 345 ntBASIC8.71□□□□□ -1.01
VPS8Q8N3P4 GAPDHP62-201ENST00000515313 990 ntBASIC8.71□□□□□ -1.01
VPS8Q8N3P4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 AC015712.7-201ENST00000615211 635 ntBASIC8.71□□□□□ -1.01
VPS8Q8N3P4 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.71□□□□□ -1.01
VPS8Q8N3P4 UGT2B24P-201ENST00000514441 1597 ntBASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms