Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 HMGN1P36-201ENST00000446623 298 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 RPL7L1P3-201ENST00000455249 689 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC110056.1-201ENST00000525759 911 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 NPM1P42-201ENST00000560329 862 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 AL445649.1-201ENST00000615941 691 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 AL357562.1-201ENST00000624911 609 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 AC003992.1-201ENST00000635364 557 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 AP000550.3-201ENST00000637734 379 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 CCNT2P1-201ENST00000423082 1315 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RAB43Q86YS6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAB43Q86YS6 MTCO1P11-201ENST00000429111 1528 ntBASIC5.64□□□□□ -1.51
RAB43Q86YS6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 AL121768.1-201ENST00000613917 2544 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 OR10R3P-201ENST00000361688 942 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 RN7SKP292-201ENST00000365522 317 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 AC087752.1-201ENST00000391360 558 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 BMS1P10-201ENST00000443754 1120 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 RPL23AP60-201ENST00000450011 454 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 RAB28P2-201ENST00000454299 641 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 GAPDHP71-201ENST00000511530 1003 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 SNORA70.20-201ENST00000516848 126 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 OR6M2P-201ENST00000529831 871 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 MIR3189-201ENST00000578735 73 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 AP001496.3-201ENST00000580230 913 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 OR7A8P-201ENST00000595427 913 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 AL583832.1-201ENST00000603227 784 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 AC116667.2-201ENST00000641075 823 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RAB43Q86YS6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RAB43Q86YS6 AP005435.3-201ENST00000531260 3198 ntBASIC5.63□□□□□ -1.51
RAB43Q86YS6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RAB43Q86YS6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RAB43Q86YS6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RAB43Q86YS6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.62□□□□□ -1.51
RAB43Q86YS6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAB43Q86YS6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAB43Q86YS6 AOX3P-204ENST00000491025 2107 ntBASIC5.62□□□□□ -1.51
RAB43Q86YS6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAB43Q86YS6 RNU1-150P-201ENST00000362491 162 ntBASIC5.62□□□□□ -1.51
RAB43Q86YS6 RN7SKP128-201ENST00000364270 303 ntBASIC5.62□□□□□ -1.51
RAB43Q86YS6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAB43Q86YS6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAB43Q86YS6 AL096711.1-201ENST00000404780 554 ntBASIC5.62□□□□□ -1.51
RAB43Q86YS6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RAB43Q86YS6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.62□□□□□ -1.51
RAB43Q86YS6 NMD3P2-201ENST00000421815 761 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms