Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 AP000676.2-201ENST00000529711 301 ntBASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 MIR3691-201ENST00000578066 90 ntBASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 NANOGP3-201ENST00000605855 286 ntBASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC141Q6ZP82 SNORA70H-201ENST00000383910 135 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 SNORA70J-201ENST00000384182 135 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AL121835.1-201ENST00000404250 354 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 RNA5SP251-201ENST00000410614 137 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 VN1R21P-201ENST00000426703 765 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC105399.1-202ENST00000447303 205 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC027667.1-201ENST00000545814 304 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC010401.2-201ENST00000575137 4934 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AL360271.1-201ENST00000395679 510 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AL389915.2-201ENST00000454576 441 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC015864.1-201ENST00000496512 544 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AGGF1P7-201ENST00000562369 913 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 WBP11P1-201ENST00000562560 1931 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 SETP3-201ENST00000581726 813 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC087763.1-201ENST00000603391 286 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 MIR6798-201ENST00000612887 67 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 AC109583.2-201ENST00000617367 129 ntBASIC8.38□□□□□ -1.07
CCDC141Q6ZP82 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC079753.1-201ENST00000623243 3868 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC023421.1-201ENST00000590535 1785 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 SNORA16A-201ENST00000384342 137 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 MIR551A-201ENST00000385042 96 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AL589647.1-201ENST00000402485 466 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC079080.1-201ENST00000479841 822 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC147055.3-201ENST00000510547 851 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC110775.1-201ENST00000513721 462 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 RNU6-941P-201ENST00000516346 108 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 RPL10P14-201ENST00000565265 298 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 WBP1LP8-201ENST00000617401 327 ntBASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.37□□□□□ -1.07
CCDC141Q6ZP82 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 BRD7P6-201ENST00000431406 1860 ntBASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms