Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AL590399.2-201ENST00000427536 309 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 RPL12P16-201ENST00000431098 498 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AC112187.1-201ENST00000455837 479 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 RPS4XP17-201ENST00000479057 754 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 AC012123.2-201ENST00000485809 248 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 RN7SL714P-201ENST00000487050 298 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 GM2AP2-201ENST00000491764 562 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 CYP4F27P-201ENST00000514557 494 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 SNORD39.2-201ENST00000579995 76 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 AL450270.1-201ENST00000606160 391 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 AC242628.1-201ENST00000606810 391 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AC025016.1-201ENST00000616746 682 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AL138693.1-201ENST00000622219 129 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 OR7E91P-202ENST00000642062 1198 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 OR5AC4P-202ENST00000642086 985 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AL591135.1-201ENST00000401578 5914 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AL136984.1-201ENST00000607611 1893 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 NENFP1-201ENST00000419476 466 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 RPEP4-201ENST00000437636 602 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 SUMO2P1-206ENST00000445436 284 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC034244.2-201ENST00000514668 858 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC136777.2-201ENST00000522979 358 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 OR6M2P-201ENST00000529831 871 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC38Q502W7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 RN7SL66P-201ENST00000582099 264 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 AL589765.6-201ENST00000601909 549 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 MTCO2P22-201ENST00000603246 681 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 KATNBL1P5-201ENST00000605015 517 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 AL096803.3-201ENST00000609032 532 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 MIR6813-201ENST00000621638 56 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 AC092159.4-201ENST00000624944 550 ntBASIC6.35□□□□□ -1.39
CCDC38Q502W7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC38Q502W7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms