Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNA5SP487-201ENST00000410186 122 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 GPS2P1-201ENST00000411761 986 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 RPS7P3-201ENST00000443360 580 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AL590004.3-202ENST00000445883 451 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 RPS18P1-201ENST00000447840 458 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 RPS23P9-201ENST00000448848 438 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC002553.3-201ENST00000453002 341 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC093890.1-201ENST00000502554 540 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 USP9YP2-201ENST00000504503 1000 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 USP9YP1-201ENST00000513521 1002 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AL390726.5-202ENST00000564800 256 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AL353729.2-201ENST00000605859 1249 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC011755.1-201ENST00000623763 2049 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 FBXL21-201ENST00000297158 1305 ntBASIC5.17□□□□□ -1.58
CCDC58Q4VC31 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC58Q4VC31 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 RBPJP7-201ENST00000442803 1447 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 RBPJP5-201ENST00000449433 1447 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 MFSD8-239ENST00000641590 2479 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 RPL11P4-201ENST00000332269 436 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 MIR27A-201ENST00000385073 78 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 YWHAZP4-201ENST00000392459 708 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 PRELID1P1-201ENST00000403549 660 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC130360.1-201ENST00000425489 1117 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AL445928.1-201ENST00000435545 222 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 HMGN1P32-201ENST00000441744 256 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 SNORD125-201ENST00000459538 96 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 GAPDHP71-201ENST00000511530 1003 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC130365.2-201ENST00000525882 1201 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC036111.2-201ENST00000533247 901 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC233702.9-201ENST00000581528 203 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AL390877.1-201ENST00000605704 214 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 GNL2P1-201ENST00000451274 2190 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 AC083843.3-201ENST00000623679 2186 ntBASIC5.16□□□□□ -1.58
CCDC58Q4VC31 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC58Q4VC31 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC58Q4VC31 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC58Q4VC31 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC58Q4VC31 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC58Q4VC31 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC58Q4VC31 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms