Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 HSPD1P7-201ENST00000447985 1686 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 RNU1-134P-201ENST00000362935 165 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RFX4Q33E94 RNA5SP431-201ENST00000410312 120 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 RN7SKP38-201ENST00000410782 309 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 RNF10P1-201ENST00000418589 369 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 AC130360.1-201ENST00000425489 1117 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.35□□□□□ -1.55
RFX4Q33E94 RPL12P49-201ENST00000441100 121 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.35□□□□□ -1.55
RFX4Q33E94 RPS7P3-201ENST00000443360 580 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX4Q33E94 OR7E22P-201ENST00000478335 1035 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 MORF4L2P1-201ENST00000503761 858 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 HMGN1P16-201ENST00000508308 283 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 NACAP5-201ENST00000509863 636 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX4Q33E94 MRPS5P3-201ENST00000515577 166 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AC110056.1-201ENST00000525759 911 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 AC130365.2-201ENST00000525882 1201 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 SMIM12P1-201ENST00000603004 274 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AC010632.3-201ENST00000611377 369 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 AC010325.3-201ENST00000641084 394 ntBASIC5.35□□□□□ -1.55
RFX4Q33E94 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX4Q33E94 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RFX4Q33E94 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFX4Q33E94 MAPK10-328ENST00000641553 4009 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.34□□□□□ -1.55
RFX4Q33E94 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.34□□□□□ -1.55
RFX4Q33E94 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 AC117409.1-201ENST00000470499 1310 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 U3.28-201ENST00000391249 210 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 RNA5SP198-201ENST00000410376 127 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.34□□□□□ -1.55
RFX4Q33E94 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.34□□□□□ -1.55
RFX4Q33E94 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.34□□□□□ -1.55
RFX4Q33E94 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX4Q33E94 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX4Q33E94 CEACAMP11-201ENST00000455211 583 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX4Q33E94 EIF3LP3-201ENST00000495197 822 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 ASNSP4-201ENST00000511103 447 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 AC137627.1-201ENST00000545761 289 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.34□□□□□ -1.55
RFX4Q33E94 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.34□□□□□ -1.55
RFX4Q33E94 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.34□□□□□ -1.55
RFX4Q33E94 AC008833.1-201ENST00000611633 691 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 AL035661.1-201ENST00000620459 1144 ntBASIC5.34□□□□□ -1.55
RFX4Q33E94 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX4Q33E94 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX4Q33E94 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RFX4Q33E94 AP004607.3-201ENST00000530354 3915 ntBASIC5.34□□□□□ -1.56
RFX4Q33E94 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.34□□□□□ -1.56
RFX4Q33E94 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.34□□□□□ -1.56
RFX4Q33E94 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RFX4Q33E94 XKRY2-202ENST00000623874 1581 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 XKRY-202ENST00000624960 1581 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX4Q33E94 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX4Q33E94 GNL2P1-201ENST00000451274 2190 ntBASIC5.33□□□□□ -1.56
RFX4Q33E94 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
RFX4Q33E94 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms