Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.13□□□□□ -1.75
UBE2D3P61077 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2D3P61077 AC073488.6-201ENST00000632293 754 ntBASIC4.13□□□□□ -1.75
UBE2D3P61077 AL357140.4-201ENST00000636827 412 ntBASIC4.13□□□□□ -1.75
UBE2D3P61077 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.13□□□□□ -1.75
UBE2D3P61077 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2D3P61077 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
UBE2D3P61077 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2D3P61077 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2D3P61077 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
UBE2D3P61077 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.13□□□□□ -1.75
UBE2D3P61077 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2D3P61077 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
UBE2D3P61077 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2D3P61077 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBE2D3P61077 AC020633.1-201ENST00000468439 2247 ntBASIC4.13□□□□□ -1.75
UBE2D3P61077 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
UBE2D3P61077 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
UBE2D3P61077 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBE2D3P61077 RNA5SP279-201ENST00000365513 117 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC087752.1-201ENST00000391360 558 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 RN7SKP146-201ENST00000410242 334 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 VN1R21P-201ENST00000426703 765 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC023141.3-201ENST00000436698 278 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 RPS12P17-201ENST00000438591 377 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 OR7E157P-201ENST00000494376 911 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 USP9YP2-201ENST00000504503 1000 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 OR7E99P-201ENST00000505750 922 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 GUSBP9-201ENST00000510138 584 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 USP9YP1-201ENST00000513521 1002 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 RNA5SP441-201ENST00000516809 88 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 AP001000.1-201ENST00000526843 742 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.12□□□□□ -1.75
UBE2D3P61077 GARSP1-201ENST00000570895 719 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 AC004232.2-201ENST00000574245 821 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC145423.1-201ENST00000605712 336 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 NANOGP3-201ENST00000605855 286 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 AL021918.2-201ENST00000613415 194 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 AL139099.4-201ENST00000614802 114 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC073488.3-201ENST00000631611 778 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.12□□□□□ -1.75
UBE2D3P61077 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.12□□□□□ -1.75
UBE2D3P61077 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 FBXL21-201ENST00000297158 1305 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 HSPD1P7-201ENST00000447985 1686 ntBASIC4.12□□□□□ -1.75
UBE2D3P61077 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
UBE2D3P61077 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
UBE2D3P61077 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.12□□□□□ -1.75
UBE2D3P61077 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
UBE2D3P61077 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.12□□□□□ -1.75
UBE2D3P61077 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE2D3P61077 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
UBE2D3P61077 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2D3P61077 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2D3P61077 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2D3P61077 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2D3P61077 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2D3P61077 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.11□□□□□ -1.75
UBE2D3P61077 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2D3P61077 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE2D3P61077 AC019072.1-201ENST00000604535 1551 ntBASIC4.11□□□□□ -1.75
UBE2D3P61077 RN7SKP184-201ENST00000362348 333 ntBASIC4.11□□□□□ -1.75
UBE2D3P61077 RN7SKP78-201ENST00000364711 318 ntBASIC4.11□□□□□ -1.75
UBE2D3P61077 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE2D3P61077 YWHAZP6-201ENST00000399764 738 ntBASIC4.11□□□□□ -1.75
UBE2D3P61077 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms