Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.03□□□□□ -1.6
ACTBP60709 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.03□□□□□ -1.6
ACTBP60709 GAPDHP62-201ENST00000515313 990 ntBASIC5.03□□□□□ -1.6
ACTBP60709 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.03□□□□□ -1.6
ACTBP60709 SNORA74.1-201ENST00000516320 180 ntBASIC5.03□□□□□ -1.6
ACTBP60709 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.03□□□□□ -1.6
ACTBP60709 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.03□□□□□ -1.6
ACTBP60709 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ACTBP60709 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.03□□□□□ -1.6
ACTBP60709 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.03□□□□□ -1.6
ACTBP60709 HIRAP1-201ENST00000605318 787 ntBASIC5.03□□□□□ -1.6
ACTBP60709 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.03□□□□□ -1.6
ACTBP60709 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ACTBP60709 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTBP60709 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ACTBP60709 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTBP60709 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTBP60709 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
ACTBP60709 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
ACTBP60709 SOCS5P3-201ENST00000425115 1576 ntBASIC5.03□□□□□ -1.6
ACTBP60709 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ACTBP60709 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.03□□□□□ -1.6
ACTBP60709 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
ACTBP60709 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.03□□□□□ -1.6
ACTBP60709 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
ACTBP60709 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
ACTBP60709 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTBP60709 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTBP60709 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTBP60709 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ACTBP60709 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 RN7SKP144-201ENST00000411108 279 ntBASIC5.02□□□□□ -1.61
ACTBP60709 MTND2P12-201ENST00000417560 1252 ntBASIC5.02□□□□□ -1.61
ACTBP60709 LINC00328-2P-201ENST00000436585 219 ntBASIC5.02□□□□□ -1.61
ACTBP60709 AL663074.2-201ENST00000440621 479 ntBASIC5.02□□□□□ -1.61
ACTBP60709 RPL5P25-201ENST00000441148 775 ntBASIC5.02□□□□□ -1.61
ACTBP60709 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ACTBP60709 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 RPS23P9-201ENST00000448848 438 ntBASIC5.02□□□□□ -1.61
ACTBP60709 AC016027.4-201ENST00000450866 277 ntBASIC5.02□□□□□ -1.61
ACTBP60709 RPL38P3-201ENST00000484463 213 ntBASIC5.02□□□□□ -1.61
ACTBP60709 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
ACTBP60709 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 RNA5SP206-201ENST00000516703 121 ntBASIC5.02□□□□□ -1.61
ACTBP60709 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.02□□□□□ -1.61
ACTBP60709 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.02□□□□□ -1.61
ACTBP60709 AL390334.1-201ENST00000556395 450 ntBASIC5.02□□□□□ -1.61
ACTBP60709 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTBP60709 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
ACTBP60709 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.02□□□□□ -1.61
ACTBP60709 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 AC090286.3-201ENST00000573133 187 ntBASIC5.02□□□□□ -1.61
ACTBP60709 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTBP60709 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.02□□□□□ -1.61
ACTBP60709 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.02□□□□□ -1.61
ACTBP60709 AC015819.1-201ENST00000613588 663 ntBASIC5.02□□□□□ -1.61
ACTBP60709 MIR6813-201ENST00000621638 56 ntBASIC5.02□□□□□ -1.61
ACTBP60709 MIR6823-201ENST00000622118 61 ntBASIC5.02□□□□□ -1.61
ACTBP60709 AC006840.1-201ENST00000623069 542 ntBASIC5.02□□□□□ -1.61
ACTBP60709 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
ACTBP60709 LINC01613-201ENST00000561476 2780 ntBASIC5.02□□□□□ -1.61
ACTBP60709 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 ABCC13-202ENST00000463099 3842 ntBASIC5.02□□□□□ -1.61
ACTBP60709 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTBP60709 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
ACTBP60709 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ACTBP60709 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ACTBP60709 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ACTBP60709 AL133243.2-201ENST00000610331 1621 ntBASIC5.01□□□□□ -1.61
ACTBP60709 AC002525.1-201ENST00000624392 1622 ntBASIC5.01□□□□□ -1.61
ACTBP60709 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ACTBP60709 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ACTBP60709 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
ACTBP60709 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ACTBP60709 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ACTBP60709 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ACTBP60709 RNU1-146P-201ENST00000364015 165 ntBASIC5.01□□□□□ -1.61
ACTBP60709 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ACTBP60709 RNU1-136P-201ENST00000384181 164 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms