Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 DSTNP5-201ENST00000427921 523 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 NDUFA5P10-201ENST00000432147 357 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 PSMD8P1-201ENST00000436275 769 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 THAP5P1-201ENST00000439089 262 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 EEF1A1P39-201ENST00000440791 250 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 HMGB1P5-202ENST00000451497 985 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC022080.2-201ENST00000452932 533 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 RPS6P2-201ENST00000454208 705 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 ATG12P2-201ENST00000456830 416 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 OR7E22P-201ENST00000478335 1035 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 RN7SL37P-201ENST00000490461 307 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC091951.3-201ENST00000504093 246 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AC008837.1-201ENST00000511513 412 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 RN7SKP141-201ENST00000516167 338 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.87□□□□□ -1.47
CLRN1P58418 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 AP003115.1-201ENST00000569849 463 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.87□□□□□ -1.47
CLRN1P58418 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 CYCSP1-201ENST00000604815 315 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AL078624.2-201ENST00000605063 554 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 AC090116.1-201ENST00000615679 446 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 NEPNP-201ENST00000404786 1371 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 AC062022.1-201ENST00000451026 1684 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 AC007342.7-201ENST00000624610 2337 ntBASIC5.87□□□□□ -1.47
CLRN1P58418 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CLRN1P58418 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.87□□□□□ -1.47
CLRN1P58418 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLRN1P58418 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLRN1P58418 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 AC005618.1-201ENST00000606901 3148 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC093909.5-201ENST00000621839 1799 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 RNU6-224P-201ENST00000384055 107 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 MIR431-201ENST00000385266 114 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 SFR1P1-201ENST00000403720 688 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 RNU4-74P-201ENST00000411280 161 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL008987.1-201ENST00000415528 237 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 MEAF6P1-201ENST00000416092 327 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 AL451136.1-201ENST00000435399 325 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 DNAJA1P5-201ENST00000440278 943 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.86□□□□□ -1.47
CLRN1P58418 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 SEPT14P24-201ENST00000447236 180 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL157827.1-201ENST00000447622 132 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLRN1P58418 MGAT2P1-201ENST00000449718 797 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.86□□□□□ -1.47
CLRN1P58418 RPL36AP55-201ENST00000454114 305 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 AL354872.1-201ENST00000456361 967 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 GTF2IP12-201ENST00000456547 356 ntBASIC5.86□□□□□ -1.47
CLRN1P58418 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.86□□□□□ -1.47
CLRN1P58418 AC115223.1-201ENST00000466377 870 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms