Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 NENFP1-201ENST00000419476 466 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 NME1P1-201ENST00000420914 382 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.51□□□□□ -1.21
RIPK4P57078 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.51□□□□□ -1.21
RIPK4P57078 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.51□□□□□ -1.21
RIPK4P57078 AL391987.1-201ENST00000441025 200 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 AC005297.1-201ENST00000444765 862 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 EEF1B2P6-201ENST00000445713 673 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 REG1CP-206ENST00000447469 496 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 YWHAEP1-201ENST00000453697 763 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 SNRPCP3-201ENST00000474888 476 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.51□□□□□ -1.21
RIPK4P57078 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.51□□□□□ -1.21
RIPK4P57078 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RIPK4P57078 AL513327.3-201ENST00000602618 469 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.51□□□□□ -1.21
RIPK4P57078 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RIPK4P57078 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
RIPK4P57078 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
RIPK4P57078 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.51□□□□□ -1.21
RIPK4P57078 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RIPK4P57078 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RIPK4P57078 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RIPK4P57078 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
RIPK4P57078 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RIPK4P57078 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.5□□□□□ -1.21
RIPK4P57078 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RIPK4P57078 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.5□□□□□ -1.21
RIPK4P57078 RNA5SP435-201ENST00000364044 108 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RIPK4P57078 AL512422.1-201ENST00000407033 553 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 SDHDP6-201ENST00000414693 480 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.5□□□□□ -1.21
RIPK4P57078 Z84478.1-201ENST00000438230 1219 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.5□□□□□ -1.21
RIPK4P57078 RPS3AP15-201ENST00000483874 781 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 RN7SL101P-201ENST00000496350 279 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 AC138866.2-201ENST00000508650 584 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 AC074087.1-201ENST00000512059 724 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 TMEM97P2-201ENST00000517841 403 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.5□□□□□ -1.21
RIPK4P57078 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.5□□□□□ -1.21
RIPK4P57078 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.5□□□□□ -1.21
RIPK4P57078 AC012146.2-201ENST00000576545 416 ntBASIC7.5□□□□□ -1.21
RIPK4P57078 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.5□□□□□ -1.21
RIPK4P57078 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.5□□□□□ -1.21
RIPK4P57078 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.5□□□□□ -1.21
RIPK4P57078 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.5□□□□□ -1.21
RIPK4P57078 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.5□□□□□ -1.21
RIPK4P57078 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.5□□□□□ -1.21
RIPK4P57078 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RIPK4P57078 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RIPK4P57078 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RIPK4P57078 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
RIPK4P57078 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RIPK4P57078 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
RIPK4P57078 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.49□□□□□ -1.21
RIPK4P57078 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.49□□□□□ -1.21
RIPK4P57078 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RIPK4P57078 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.49□□□□□ -1.21
RIPK4P57078 AC232271.1-201ENST00000602455 2715 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 RNA5SP131-201ENST00000365452 119 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 RNA5SP178-201ENST00000410380 128 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 RN7SKP286-201ENST00000410894 299 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 RMRPP5-201ENST00000411156 267 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 BMS1P17-202ENST00000416720 316 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.49□□□□□ -1.21
RIPK4P57078 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.49□□□□□ -1.21
RIPK4P57078 RPL12P39-201ENST00000455456 496 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 RPS23P2-201ENST00000463671 415 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 CR383656.1-201ENST00000484916 377 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 AC109481.1-201ENST00000509173 282 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.49□□□□□ -1.21
RIPK4P57078 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.49□□□□□ -1.21
RIPK4P57078 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RIPK4P57078 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.49□□□□□ -1.21
RIPK4P57078 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.49□□□□□ -1.21
RIPK4P57078 AL163952.1-202ENST00000569625 600 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 SNORD95-201ENST00000579879 68 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 MIR4505-201ENST00000582238 73 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 MIR6862-1-201ENST00000613016 70 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 MIR6862-2-201ENST00000614755 70 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.49□□□□□ -1.21
RIPK4P57078 AL035661.1-201ENST00000620459 1144 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 AL390318.1-201ENST00000624564 687 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RIPK4P57078 MSL3P1-202ENST00000440028 1468 ntBASIC7.49□□□□□ -1.21
RIPK4P57078 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.49□□□□□ -1.21
RIPK4P57078 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RIPK4P57078 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
RIPK4P57078 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms