Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TRIM60P16-201ENST00000444048 694 ntBASIC5.74□□□□□ -1.49
CDH13P55290 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH13P55290 SNRPCP3-201ENST00000474888 476 ntBASIC5.74□□□□□ -1.49
CDH13P55290 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CDH13P55290 AC108103.1-201ENST00000511286 446 ntBASIC5.74□□□□□ -1.49
CDH13P55290 MAST4-IT1-201ENST00000514241 658 ntBASIC5.74□□□□□ -1.49
CDH13P55290 AC097486.1-201ENST00000515331 210 ntBASIC5.74□□□□□ -1.49
CDH13P55290 MRPS5P3-201ENST00000515577 166 ntBASIC5.74□□□□□ -1.49
CDH13P55290 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH13P55290 AC005000.1-201ENST00000536192 288 ntBASIC5.74□□□□□ -1.49
CDH13P55290 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH13P55290 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH13P55290 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH13P55290 GARSP1-201ENST00000570895 719 ntBASIC5.74□□□□□ -1.49
CDH13P55290 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH13P55290 QTRT1P1-201ENST00000604344 1078 ntBASIC5.74□□□□□ -1.49
CDH13P55290 BX322635.1-201ENST00000605804 496 ntBASIC5.74□□□□□ -1.49
CDH13P55290 AL021918.2-201ENST00000613415 194 ntBASIC5.74□□□□□ -1.49
CDH13P55290 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 AP004607.3-201ENST00000530354 3915 ntBASIC5.74□□□□□ -1.49
CDH13P55290 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH13P55290 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.74□□□□□ -1.49
CDH13P55290 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH13P55290 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH13P55290 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH13P55290 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
CDH13P55290 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 MFSD8-219ENST00000641228 2559 ntBASIC5.73□□□□□ -1.49
CDH13P55290 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 GNL2P1-201ENST00000451274 2190 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AL137141.1-201ENST00000624622 4836 ntBASIC5.73□□□□□ -1.49
CDH13P55290 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH13P55290 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CDH13P55290 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
CDH13P55290 MIR191-201ENST00000384873 92 ntBASIC5.73□□□□□ -1.49
CDH13P55290 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH13P55290 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CDH13P55290 AL136116.2-201ENST00000404020 785 ntBASIC5.73□□□□□ -1.49
CDH13P55290 RN7SKP146-201ENST00000410242 334 ntBASIC5.73□□□□□ -1.49
CDH13P55290 RPL35AP3-201ENST00000414680 288 ntBASIC5.73□□□□□ -1.49
CDH13P55290 METTL15P3-201ENST00000415522 1221 ntBASIC5.73□□□□□ -1.49
CDH13P55290 RPS4XP5-201ENST00000419038 768 ntBASIC5.73□□□□□ -1.49
CDH13P55290 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH13P55290 RPSAP65-201ENST00000429660 595 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH13P55290 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 AL445466.1-201ENST00000448432 357 ntBASIC5.73□□□□□ -1.49
CDH13P55290 Z83838.1-202ENST00000456225 839 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH13P55290 RN7SL269P-201ENST00000467795 305 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AC006539.1-201ENST00000481419 501 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH13P55290 AC009879.1-201ENST00000520029 839 ntBASIC5.73□□□□□ -1.49
CDH13P55290 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH13P55290 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH13P55290 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH13P55290 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH13P55290 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH13P55290 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 TXNP4-201ENST00000575018 310 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AC023389.2-201ENST00000580031 955 ntBASIC5.73□□□□□ -1.49
CDH13P55290 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 AC068768.2-201ENST00000602352 343 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AL513327.3-201ENST00000602618 469 ntBASIC5.73□□□□□ -1.49
CDH13P55290 RNU6-84P-201ENST00000607737 102 ntBASIC5.73□□□□□ -1.49
CDH13P55290 uc_338.29-201ENST00000615099 168 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AL445670.1-201ENST00000618889 801 ntBASIC5.73□□□□□ -1.49
CDH13P55290 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 AL357140.4-201ENST00000636827 412 ntBASIC5.73□□□□□ -1.49
CDH13P55290 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH13P55290 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH13P55290 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDH13P55290 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 RBPJP7-201ENST00000442803 1447 ntBASIC5.73□□□□□ -1.49
CDH13P55290 RBPJP5-201ENST00000449433 1447 ntBASIC5.73□□□□□ -1.49
CDH13P55290 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH13P55290 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 MFSD8-239ENST00000641590 2479 ntBASIC5.72□□□□□ -1.49
CDH13P55290 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH13P55290 OR5T3-201ENST00000303059 1023 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms