Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH4P55283 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH4P55283 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH4P55283 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
CDH4P55283 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH4P55283 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH4P55283 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH4P55283 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH4P55283 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH4P55283 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDH4P55283 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH4P55283 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH4P55283 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 AP002512.4-202ENST00000641599 4530 ntBASIC5.93□□□□□ -1.46
CDH4P55283 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH4P55283 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH4P55283 AL121977.1-201ENST00000401636 979 ntBASIC5.93□□□□□ -1.46
CDH4P55283 RPS26P38-201ENST00000414476 348 ntBASIC5.93□□□□□ -1.46
CDH4P55283 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH4P55283 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH4P55283 AC093155.2-201ENST00000420734 937 ntBASIC5.93□□□□□ -1.46
CDH4P55283 OR5W1P-201ENST00000423705 938 ntBASIC5.93□□□□□ -1.46
CDH4P55283 BX119321.1-201ENST00000428912 797 ntBASIC5.93□□□□□ -1.46
CDH4P55283 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.93□□□□□ -1.46
CDH4P55283 HMGB3P24-201ENST00000433260 622 ntBASIC5.93□□□□□ -1.46
CDH4P55283 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH4P55283 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH4P55283 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH4P55283 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH4P55283 FRG2FP-204ENST00000453982 852 ntBASIC5.93□□□□□ -1.46
CDH4P55283 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 RN7SL570P-201ENST00000484405 292 ntBASIC5.93□□□□□ -1.46
CDH4P55283 PPIAP19-201ENST00000486414 492 ntBASIC5.93□□□□□ -1.46
CDH4P55283 AC009120.1-201ENST00000493458 473 ntBASIC5.93□□□□□ -1.46
CDH4P55283 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH4P55283 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH4P55283 AC021678.3-201ENST00000517893 476 ntBASIC5.93□□□□□ -1.46
CDH4P55283 AC139365.2-201ENST00000517972 253 ntBASIC5.93□□□□□ -1.46
CDH4P55283 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 AC096996.1-201ENST00000563813 325 ntBASIC5.93□□□□□ -1.46
CDH4P55283 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.93□□□□□ -1.46
CDH4P55283 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH4P55283 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH4P55283 AL357153.4-201ENST00000620487 1016 ntBASIC5.93□□□□□ -1.46
CDH4P55283 AC026124.2-201ENST00000621847 656 ntBASIC5.93□□□□□ -1.46
CDH4P55283 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 AC087565.3-203ENST00000641018 837 ntBASIC5.93□□□□□ -1.46
CDH4P55283 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CDH4P55283 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH4P55283 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH4P55283 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 RNF19BPY-201ENST00000458209 1550 ntBASIC5.93□□□□□ -1.46
CDH4P55283 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.93□□□□□ -1.46
CDH4P55283 AL034546.1-201ENST00000623740 3693 ntBASIC5.93□□□□□ -1.46
CDH4P55283 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH4P55283 IMMTP1-201ENST00000435590 2219 ntBASIC5.93□□□□□ -1.46
CDH4P55283 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CDH4P55283 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDH4P55283 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CDH4P55283 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH4P55283 RNA5SP394-201ENST00000364216 119 ntBASIC5.92□□□□□ -1.46
CDH4P55283 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CDH4P55283 SNORA70.9-201ENST00000384370 135 ntBASIC5.92□□□□□ -1.46
CDH4P55283 TRAV35-201ENST00000390462 330 ntBASIC5.92□□□□□ -1.46
CDH4P55283 HMGB1P20-201ENST00000402555 677 ntBASIC5.92□□□□□ -1.46
CDH4P55283 NPM1P38-201ENST00000403835 865 ntBASIC5.92□□□□□ -1.46
CDH4P55283 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.92□□□□□ -1.46
CDH4P55283 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH4P55283 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH4P55283 RPL34P3-201ENST00000421454 338 ntBASIC5.92□□□□□ -1.46
CDH4P55283 CRIP1P1-201ENST00000427567 185 ntBASIC5.92□□□□□ -1.46
CDH4P55283 AC104843.2-201ENST00000427666 297 ntBASIC5.92□□□□□ -1.46
CDH4P55283 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH4P55283 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.92□□□□□ -1.46
CDH4P55283 GAPDHP48-201ENST00000436626 961 ntBASIC5.92□□□□□ -1.46
CDH4P55283 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH4P55283 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.92□□□□□ -1.46
CDH4P55283 OR7E116P-201ENST00000448529 957 ntBASIC5.92□□□□□ -1.46
CDH4P55283 LRRC37A14P-201ENST00000452297 462 ntBASIC5.92□□□□□ -1.46
CDH4P55283 AC016724.1-201ENST00000453215 421 ntBASIC5.92□□□□□ -1.46
CDH4P55283 RSU1P1-201ENST00000453416 441 ntBASIC5.92□□□□□ -1.46
CDH4P55283 NXT1P1-201ENST00000458481 316 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms