Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.47□□□□□ -1.37
COPB1P53618 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COPB1P53618 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.47□□□□□ -1.37
COPB1P53618 DNM1P47-203ENST00000571780 12667 ntBASIC6.47□□□□□ -1.37
COPB1P53618 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 AC232271.1-201ENST00000602455 2715 ntBASIC6.47□□□□□ -1.37
COPB1P53618 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 RNU1-134P-201ENST00000362935 165 ntBASIC6.47□□□□□ -1.37
COPB1P53618 RNU6-316P-201ENST00000391027 107 ntBASIC6.47□□□□□ -1.37
COPB1P53618 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.47□□□□□ -1.37
COPB1P53618 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.47□□□□□ -1.37
COPB1P53618 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.47□□□□□ -1.37
COPB1P53618 AL139158.1-201ENST00000424719 340 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AC130360.1-201ENST00000425489 1117 ntBASIC6.47□□□□□ -1.37
COPB1P53618 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.47□□□□□ -1.37
COPB1P53618 RPS7P3-201ENST00000443360 580 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AL356390.1-201ENST00000455684 397 ntBASIC6.47□□□□□ -1.37
COPB1P53618 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.47□□□□□ -1.37
COPB1P53618 AC008628.1-201ENST00000508663 265 ntBASIC6.47□□□□□ -1.37
COPB1P53618 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.47□□□□□ -1.37
COPB1P53618 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.47□□□□□ -1.37
COPB1P53618 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
COPB1P53618 AC130365.2-201ENST00000525882 1201 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.47□□□□□ -1.37
COPB1P53618 AL121594.2-201ENST00000541658 472 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.47□□□□□ -1.37
COPB1P53618 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.47□□□□□ -1.37
COPB1P53618 AL163952.1-202ENST00000569625 600 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.47□□□□□ -1.37
COPB1P53618 MIR4701-201ENST00000583094 63 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.47□□□□□ -1.37
COPB1P53618 AL513327.3-201ENST00000602618 469 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AL139022.2-201ENST00000606934 443 ntBASIC6.47□□□□□ -1.37
COPB1P53618 SNORA35B-201ENST00000607417 129 ntBASIC6.47□□□□□ -1.37
COPB1P53618 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.47□□□□□ -1.37
COPB1P53618 AL512506.1-201ENST00000613918 449 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AL512652.1-201ENST00000619006 500 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AL591926.1-201ENST00000620542 217 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AC073593.1-201ENST00000624500 411 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AC010325.3-201ENST00000641084 394 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AC011933.2-201ENST00000578539 2790 ntBASIC6.47□□□□□ -1.37
COPB1P53618 AL158152.1-201ENST00000602652 1435 ntBASIC6.47□□□□□ -1.37
COPB1P53618 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COPB1P53618 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
COPB1P53618 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPB1P53618 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.47□□□□□ -1.37
COPB1P53618 AC027279.4-201ENST00000624371 2072 ntBASIC6.46□□□□□ -1.37
COPB1P53618 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COPB1P53618 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.46□□□□□ -1.37
COPB1P53618 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COPB1P53618 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
COPB1P53618 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COPB1P53618 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COPB1P53618 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COPB1P53618 RNU6-819P-201ENST00000364116 107 ntBASIC6.46□□□□□ -1.38
COPB1P53618 RNA5SP232-201ENST00000364144 119 ntBASIC6.46□□□□□ -1.38
COPB1P53618 RN7SKP78-201ENST00000364711 318 ntBASIC6.46□□□□□ -1.38
COPB1P53618 RNU6-883P-201ENST00000384597 107 ntBASIC6.46□□□□□ -1.38
COPB1P53618 MIR188-201ENST00000385034 86 ntBASIC6.46□□□□□ -1.38
COPB1P53618 AL607077.1-201ENST00000401718 499 ntBASIC6.46□□□□□ -1.38
COPB1P53618 OR1F12-201ENST00000402365 945 ntBASIC6.46□□□□□ -1.38
COPB1P53618 SNRPEP6-201ENST00000407465 277 ntBASIC6.46□□□□□ -1.38
COPB1P53618 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.46□□□□□ -1.38
COPB1P53618 RN7SKP279-201ENST00000411383 298 ntBASIC6.46□□□□□ -1.38
COPB1P53618 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.46□□□□□ -1.38
COPB1P53618 FAR1P1-201ENST00000427163 934 ntBASIC6.46□□□□□ -1.38
COPB1P53618 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.46□□□□□ -1.38
COPB1P53618 NDUFA5P1-201ENST00000433858 341 ntBASIC6.46□□□□□ -1.38
COPB1P53618 AC242426.1-201ENST00000435270 960 ntBASIC6.46□□□□□ -1.38
COPB1P53618 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COPB1P53618 LDHAP2-201ENST00000437325 985 ntBASIC6.46□□□□□ -1.38
COPB1P53618 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.46□□□□□ -1.38
COPB1P53618 CTSLP6-201ENST00000458273 1002 ntBASIC6.46□□□□□ -1.38
COPB1P53618 OR7E22P-201ENST00000478335 1035 ntBASIC6.46□□□□□ -1.38
COPB1P53618 AC006539.1-201ENST00000481419 501 ntBASIC6.46□□□□□ -1.38
COPB1P53618 RN7SL170P-201ENST00000487098 295 ntBASIC6.46□□□□□ -1.38
COPB1P53618 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.46□□□□□ -1.38
COPB1P53618 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.46□□□□□ -1.38
COPB1P53618 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.46□□□□□ -1.38
COPB1P53618 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COPB1P53618 HMGN1P17-201ENST00000513734 295 ntBASIC6.46□□□□□ -1.38
COPB1P53618 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.46□□□□□ -1.38
COPB1P53618 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.46□□□□□ -1.38
COPB1P53618 OR4A42P-201ENST00000531397 938 ntBASIC6.46□□□□□ -1.38
COPB1P53618 NPIPB14P-203ENST00000532298 987 ntBASIC6.46□□□□□ -1.38
COPB1P53618 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.46□□□□□ -1.38
COPB1P53618 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.46□□□□□ -1.38
COPB1P53618 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.46□□□□□ -1.38
COPB1P53618 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.46□□□□□ -1.38
COPB1P53618 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.46□□□□□ -1.38
COPB1P53618 RPAP2P1-201ENST00000603626 1168 ntBASIC6.46□□□□□ -1.38
COPB1P53618 WBP1LP12-201ENST00000604449 331 ntBASIC6.46□□□□□ -1.38
COPB1P53618 AC012676.3-201ENST00000614983 479 ntBASIC6.46□□□□□ -1.38
COPB1P53618 AL445670.1-201ENST00000618889 801 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms