Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.77□□□□□ -1.49
PDX1P52945 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.77□□□□□ -1.49
PDX1P52945 AC022404.1-201ENST00000555320 273 ntBASIC5.77□□□□□ -1.49
PDX1P52945 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.77□□□□□ -1.49
PDX1P52945 AC015802.2-201ENST00000589690 189 ntBASIC5.77□□□□□ -1.49
PDX1P52945 AC013244.1-201ENST00000604279 193 ntBASIC5.77□□□□□ -1.49
PDX1P52945 MIR6719-201ENST00000622428 87 ntBASIC5.77□□□□□ -1.49
PDX1P52945 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.77□□□□□ -1.49
PDX1P52945 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDX1P52945 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDX1P52945 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDX1P52945 OR4G1P-202ENST00000641173 1788 ntBASIC5.77□□□□□ -1.49
PDX1P52945 MTCO1P22-201ENST00000604619 1360 ntBASIC5.77□□□□□ -1.49
PDX1P52945 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDX1P52945 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.77□□□□□ -1.49
PDX1P52945 AC005725.1-201ENST00000577346 2607 ntBASIC5.77□□□□□ -1.49
PDX1P52945 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDX1P52945 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDX1P52945 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 AC068769.1-201ENST00000474767 2426 ntBASIC5.76□□□□□ -1.49
PDX1P52945 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDX1P52945 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDX1P52945 AL121768.1-201ENST00000613917 2544 ntBASIC5.76□□□□□ -1.49
PDX1P52945 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.76□□□□□ -1.49
PDX1P52945 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.76□□□□□ -1.49
PDX1P52945 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDX1P52945 SELENOWP1-201ENST00000322792 252 ntBASIC5.76□□□□□ -1.49
PDX1P52945 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 SNORA64.1-201ENST00000362600 132 ntBASIC5.76□□□□□ -1.49
PDX1P52945 RNA5SP375-201ENST00000362975 119 ntBASIC5.76□□□□□ -1.49
PDX1P52945 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.76□□□□□ -1.49
PDX1P52945 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.76□□□□□ -1.49
PDX1P52945 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.76□□□□□ -1.49
PDX1P52945 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.76□□□□□ -1.49
PDX1P52945 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 CYCSP22-201ENST00000517555 339 ntBASIC5.76□□□□□ -1.49
PDX1P52945 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.76□□□□□ -1.49
PDX1P52945 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.76□□□□□ -1.49
PDX1P52945 AC090651.1-201ENST00000567865 634 ntBASIC5.76□□□□□ -1.49
PDX1P52945 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 AC104695.2-201ENST00000605056 775 ntBASIC5.76□□□□□ -1.49
PDX1P52945 AC092944.2-201ENST00000605443 889 ntBASIC5.76□□□□□ -1.49
PDX1P52945 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDX1P52945 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.76□□□□□ -1.49
PDX1P52945 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDX1P52945 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PDX1P52945 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDX1P52945 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.75□□□□□ -1.49
PDX1P52945 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDX1P52945 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.75□□□□□ -1.49
PDX1P52945 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
PDX1P52945 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PDX1P52945 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
PDX1P52945 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.75□□□□□ -1.49
PDX1P52945 OR3A2-201ENST00000408891 1076 ntBASIC5.75□□□□□ -1.49
PDX1P52945 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.75□□□□□ -1.49
PDX1P52945 SLC25A51P1-201ENST00000468432 871 ntBASIC5.75□□□□□ -1.49
PDX1P52945 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 MORF4L2P1-201ENST00000503761 858 ntBASIC5.75□□□□□ -1.49
PDX1P52945 RN7SKP5-201ENST00000517045 272 ntBASIC5.75□□□□□ -1.49
PDX1P52945 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.75□□□□□ -1.49
PDX1P52945 AC007494.1-201ENST00000562293 760 ntBASIC5.75□□□□□ -1.49
PDX1P52945 AC016180.1-201ENST00000567945 403 ntBASIC5.75□□□□□ -1.49
PDX1P52945 AC020916.2-201ENST00000591242 360 ntBASIC5.75□□□□□ -1.49
PDX1P52945 AC027334.1-201ENST00000603257 310 ntBASIC5.75□□□□□ -1.49
PDX1P52945 AL589674.2-201ENST00000604304 337 ntBASIC5.75□□□□□ -1.49
PDX1P52945 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.75□□□□□ -1.49
PDX1P52945 SNORA35B-201ENST00000607417 129 ntBASIC5.75□□□□□ -1.49
PDX1P52945 AP000864.1-201ENST00000609424 650 ntBASIC5.75□□□□□ -1.49
PDX1P52945 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.75□□□□□ -1.49
PDX1P52945 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 AL731532.1-201ENST00000623972 4236 ntBASIC5.75□□□□□ -1.49
PDX1P52945 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDX1P52945 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms