Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CX3CR1P49238 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CX3CR1P49238 GVINP1-202ENST00000531871 7271 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 RN7SKP78-201ENST00000364711 318 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CX3CR1P49238 SNORA5.1-201ENST00000384275 131 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 SNORA51.9-201ENST00000384295 124 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 MIR130B-202ENST00000385018 82 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CX3CR1P49238 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CR1P49238 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CR1P49238 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CR1P49238 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CR1P49238 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CR1P49238 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 AC099670.2-201ENST00000435130 321 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC073072.2-201ENST00000447425 348 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC005077.1-201ENST00000449226 375 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 DDX18P6-201ENST00000450119 1997 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CR1P49238 AL354854.1-201ENST00000455940 1363 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC009963.3-201ENST00000458090 486 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.1□□□□□ -1.59
CX3CR1P49238 PDCL3P4-201ENST00000489621 720 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CR1P49238 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CR1P49238 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CX3CR1P49238 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CR1P49238 RN7SKP238-201ENST00000516483 249 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC009879.1-201ENST00000520029 839 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CR1P49238 OR4A43P-201ENST00000532938 908 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CR1P49238 AC126615.2-201ENST00000553003 515 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CR1P49238 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CR1P49238 MIR3154-201ENST00000577829 84 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CR1P49238 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.1□□□□□ -1.59
CX3CR1P49238 AL161912.3-201ENST00000605404 628 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC145423.1-201ENST00000605712 336 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 AC092266.1-201ENST00000610958 165 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 AL357153.4-201ENST00000620487 1016 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AL136228.1-201ENST00000622221 319 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 AC005618.4-201ENST00000625053 554 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 OR11H2-202ENST00000641517 1085 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CX3CR1P49238 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CX3CR1P49238 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CX3CR1P49238 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CX3CR1P49238 AC009962.1-201ENST00000567327 3813 ntBASIC5.1□□□□□ -1.59
CX3CR1P49238 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CR1P49238 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CR1P49238 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CX3CR1P49238 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CR1P49238 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CR1P49238 QRSL1P1-201ENST00000400977 1540 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AC011933.2-201ENST00000578539 2790 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AL929601.4-201ENST00000613011 1341 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CR1P49238 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CR1P49238 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CR1P49238 AC016739.1-201ENST00000405359 345 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 DEFA9P-201ENST00000433042 285 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AL354893.1-201ENST00000433735 348 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AC138761.5-201ENST00000433967 325 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 NPM1P18-201ENST00000434232 732 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CR1P49238 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CR1P49238 AC104849.1-201ENST00000462623 405 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AL157777.1-201ENST00000468100 304 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 DEFB109A-201ENST00000482450 265 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 EIF4E2P2-201ENST00000492033 736 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AC091874.2-201ENST00000505889 720 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AC018797.1-201ENST00000510791 255 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CR1P49238 AP003396.4-201ENST00000527574 265 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CR1P49238 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CR1P49238 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.09□□□□□ -1.59
CX3CR1P49238 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CR1P49238 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CX3CR1P49238 OR1E3-201ENST00000575608 948 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.09□□□□□ -1.59
CX3CR1P49238 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CX3CR1P49238 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.09□□□□□ -1.59
CX3CR1P49238 AC124916.2-201ENST00000604416 224 ntBASIC5.09□□□□□ -1.59
CX3CR1P49238 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms