Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC139365.2-201ENST00000517972 253 ntBASIC6□□□□□ -1.45
SLC1A1P43005 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6□□□□□ -1.45
SLC1A1P43005 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6□□□□□ -1.45
SLC1A1P43005 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6□□□□□ -1.45
SLC1A1P43005 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6□□□□□ -1.45
SLC1A1P43005 AC006530.1-201ENST00000555980 571 ntBASIC6□□□□□ -1.45
SLC1A1P43005 AL845552.1-201ENST00000556820 323 ntBASIC6□□□□□ -1.45
SLC1A1P43005 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6□□□□□ -1.45
SLC1A1P43005 AGGF1P7-201ENST00000562369 913 ntBASIC6□□□□□ -1.45
SLC1A1P43005 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6□□□□□ -1.45
SLC1A1P43005 MIR3154-201ENST00000577829 84 ntBASIC6□□□□□ -1.45
SLC1A1P43005 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
SLC1A1P43005 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6□□□□□ -1.45
SLC1A1P43005 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6□□□□□ -1.45
SLC1A1P43005 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6□□□□□ -1.45
SLC1A1P43005 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
SLC1A1P43005 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SLC1A1P43005 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC1A1P43005 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SLC1A1P43005 OR4F13P-202ENST00000560066 2054 ntBASIC6□□□□□ -1.45
SLC1A1P43005 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6□□□□□ -1.45
SLC1A1P43005 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC1A1P43005 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC1A1P43005 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC1A1P43005 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC1A1P43005 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC1A1P43005 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC1A1P43005 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC1A1P43005 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC1A1P43005 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SLC1A1P43005 COX6B1P3-201ENST00000312310 260 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 AL121886.1-201ENST00000358609 435 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC1A1P43005 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 REREP1Y-201ENST00000422655 198 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 AL354766.1-201ENST00000423396 542 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 TMEM183AP1-205ENST00000432739 290 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 REREP2Y-201ENST00000439103 200 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 LINC02210-201ENST00000444561 288 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 RPS17P15-201ENST00000475609 349 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 ATP5LP5-201ENST00000483050 299 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 LSM3P4-201ENST00000502948 309 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 HMGN2P36-201ENST00000529541 409 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC1A1P43005 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.99□□□□□ -1.45
SLC1A1P43005 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.99□□□□□ -1.45
SLC1A1P43005 AC138207.8-204ENST00000579588 527 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 AC023389.2-201ENST00000580031 955 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 MIR4433B-201ENST00000581329 102 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.99□□□□□ -1.45
SLC1A1P43005 AC091167.5-201ENST00000605689 894 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 AC090607.5-201ENST00000615692 224 ntBASIC5.99□□□□□ -1.45
SLC1A1P43005 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.99□□□□□ -1.45
SLC1A1P43005 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.99□□□□□ -1.45
SLC1A1P43005 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SLC1A1P43005 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.98□□□□□ -1.45
SLC1A1P43005 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 AC005042.1-201ENST00000393397 800 ntBASIC5.98□□□□□ -1.45
SLC1A1P43005 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.98□□□□□ -1.45
SLC1A1P43005 AC096921.1-201ENST00000411661 375 ntBASIC5.98□□□□□ -1.45
SLC1A1P43005 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.98□□□□□ -1.45
SLC1A1P43005 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.98□□□□□ -1.45
SLC1A1P43005 CST12P-201ENST00000457644 362 ntBASIC5.98□□□□□ -1.45
SLC1A1P43005 AC068228.1-201ENST00000461723 211 ntBASIC5.98□□□□□ -1.45
SLC1A1P43005 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.98□□□□□ -1.45
SLC1A1P43005 AC073610.1-201ENST00000489971 396 ntBASIC5.98□□□□□ -1.45
SLC1A1P43005 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.98□□□□□ -1.45
SLC1A1P43005 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.98□□□□□ -1.45
SLC1A1P43005 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.98□□□□□ -1.45
SLC1A1P43005 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.98□□□□□ -1.45
SLC1A1P43005 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.98□□□□□ -1.45
SLC1A1P43005 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.98□□□□□ -1.45
SLC1A1P43005 AC007786.3-201ENST00000615154 596 ntBASIC5.98□□□□□ -1.45
SLC1A1P43005 AP001052.1-201ENST00000626421 99 ntBASIC5.98□□□□□ -1.45
SLC1A1P43005 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.98□□□□□ -1.45
SLC1A1P43005 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
SLC1A1P43005 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SLC1A1P43005 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC1A1P43005 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SLC1A1P43005 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.97□□□□□ -1.45
SLC1A1P43005 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC1A1P43005 AP005435.3-201ENST00000531260 3198 ntBASIC5.97□□□□□ -1.45
SLC1A1P43005 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms