Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.43□□□□□ -1.54
RFC3P40938 GNG5P2-201ENST00000372054 207 ntBASIC5.43□□□□□ -1.54
RFC3P40938 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 RNA5SP178-201ENST00000410380 128 ntBASIC5.43□□□□□ -1.54
RFC3P40938 RN7SKP206-201ENST00000410823 293 ntBASIC5.43□□□□□ -1.54
RFC3P40938 CDY17P-201ENST00000414121 1282 ntBASIC5.43□□□□□ -1.54
RFC3P40938 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.43□□□□□ -1.54
RFC3P40938 REREP1Y-201ENST00000422655 198 ntBASIC5.43□□□□□ -1.54
RFC3P40938 CHEK2P5-201ENST00000423877 246 ntBASIC5.43□□□□□ -1.54
RFC3P40938 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 VTI1BP4-201ENST00000427516 527 ntBASIC5.43□□□□□ -1.54
RFC3P40938 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.43□□□□□ -1.54
RFC3P40938 RPL12P16-201ENST00000431098 498 ntBASIC5.43□□□□□ -1.54
RFC3P40938 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.43□□□□□ -1.54
RFC3P40938 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 REREP2Y-201ENST00000439103 200 ntBASIC5.43□□□□□ -1.54
RFC3P40938 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 HMGN1P36-201ENST00000446623 298 ntBASIC5.43□□□□□ -1.54
RFC3P40938 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.43□□□□□ -1.54
RFC3P40938 RN7SL352P-201ENST00000466002 277 ntBASIC5.43□□□□□ -1.54
RFC3P40938 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 AL122020.1-201ENST00000472287 459 ntBASIC5.43□□□□□ -1.54
RFC3P40938 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.43□□□□□ -1.54
RFC3P40938 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.43□□□□□ -1.54
RFC3P40938 AC079600.1-201ENST00000550326 297 ntBASIC5.43□□□□□ -1.54
RFC3P40938 AC135626.1-201ENST00000556983 435 ntBASIC5.43□□□□□ -1.54
RFC3P40938 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.43□□□□□ -1.54
RFC3P40938 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.43□□□□□ -1.54
RFC3P40938 RN7SL787P-201ENST00000613000 284 ntBASIC5.43□□□□□ -1.54
RFC3P40938 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 AC126175.1-201ENST00000617041 758 ntBASIC5.43□□□□□ -1.54
RFC3P40938 AC000095.2-202ENST00000637415 154 ntBASIC5.43□□□□□ -1.54
RFC3P40938 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 AL121768.1-201ENST00000613917 2544 ntBASIC5.43□□□□□ -1.54
RFC3P40938 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RFC3P40938 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.43□□□□□ -1.54
RFC3P40938 AC109446.4-201ENST00000623235 2755 ntBASIC5.43□□□□□ -1.54
RFC3P40938 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFC3P40938 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 AC005261.6-201ENST00000623072 1387 ntBASIC5.42□□□□□ -1.54
RFC3P40938 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
RFC3P40938 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.42□□□□□ -1.54
RFC3P40938 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.42□□□□□ -1.54
RFC3P40938 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.42□□□□□ -1.54
RFC3P40938 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RFC3P40938 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 RN7SKP128-201ENST00000364270 303 ntBASIC5.42□□□□□ -1.54
RFC3P40938 RN7SKP292-201ENST00000365522 317 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AL354766.1-201ENST00000423396 542 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.42□□□□□ -1.54
RFC3P40938 BX119904.3-201ENST00000428194 957 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.42□□□□□ -1.54
RFC3P40938 AC242426.1-201ENST00000435270 960 ntBASIC5.42□□□□□ -1.54
RFC3P40938 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.42□□□□□ -1.54
RFC3P40938 YWHAEP1-201ENST00000453697 763 ntBASIC5.42□□□□□ -1.54
RFC3P40938 RAB28P2-201ENST00000454299 641 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AL022319.1-201ENST00000458183 1167 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AC104164.1-201ENST00000460282 590 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AC023245.1-201ENST00000468501 517 ntBASIC5.42□□□□□ -1.54
RFC3P40938 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.42□□□□□ -1.54
RFC3P40938 AC093719.1-201ENST00000480427 441 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.42□□□□□ -1.54
RFC3P40938 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.42□□□□□ -1.54
RFC3P40938 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.42□□□□□ -1.54
RFC3P40938 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.42□□□□□ -1.54
RFC3P40938 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.42□□□□□ -1.54
RFC3P40938 AC010487.1-201ENST00000594408 1172 ntBASIC5.42□□□□□ -1.54
RFC3P40938 COX6CP7-201ENST00000597056 208 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.42□□□□□ -1.54
RFC3P40938 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.42□□□□□ -1.54
RFC3P40938 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RFC3P40938 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFC3P40938 MTCO1P11-201ENST00000429111 1528 ntBASIC5.42□□□□□ -1.54
RFC3P40938 AL078595.2-201ENST00000605309 1780 ntBASIC5.42□□□□□ -1.54
RFC3P40938 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.41□□□□□ -1.54
RFC3P40938 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFC3P40938 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms