Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA9P31269 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXA9P31269 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA9P31269 AL357752.1-201ENST00000412817 349 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 RPL23AP18-201ENST00000416139 468 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 SETP9-201ENST00000423837 832 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXA9P31269 CFL1P1-202ENST00000432948 411 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 AC012075.1-201ENST00000436549 580 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXA9P31269 AC087672.1-201ENST00000479876 766 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 RN7SL570P-201ENST00000484405 292 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXA9P31269 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA9P31269 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXA9P31269 SUMO2P19-201ENST00000518920 295 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 AC023389.2-201ENST00000580031 955 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA9P31269 AC063977.5-201ENST00000601044 974 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 AC004890.3-201ENST00000605566 1095 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 AC018445.2-201ENST00000622987 260 ntBASIC6.08□□□□□ -1.44
HOXA9P31269 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA9P31269 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA9P31269 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA9P31269 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA9P31269 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA9P31269 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXA9P31269 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXA9P31269 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXA9P31269 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXA9P31269 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXA9P31269 AL353763.1-201ENST00000624467 1628 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXA9P31269 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 SRRM1P3-201ENST00000426911 2678 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 AC235565.1-201ENST00000456962 1325 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 AL159987.1-201ENST00000347911 293 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 RNA5SP131-201ENST00000365452 119 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 MIR1286-201ENST00000408112 78 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 RNU4-34P-201ENST00000410431 124 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXA9P31269 AC016027.5-201ENST00000427227 210 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 LDHBP2-201ENST00000456969 1005 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 AL603882.1-201ENST00000463059 681 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 AC008410.1-201ENST00000483777 339 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 RPL38P3-201ENST00000484463 213 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 EIF1P7-201ENST00000487533 337 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXA9P31269 AC027026.1-201ENST00000532323 742 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXA9P31269 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXA9P31269 RBM22P12-201ENST00000567098 1255 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 AL390318.1-201ENST00000624564 687 ntBASIC6.07□□□□□ -1.44
HOXA9P31269 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXA9P31269 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HOXA9P31269 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXA9P31269 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXA9P31269 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXA9P31269 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXA9P31269 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXA9P31269 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 AC007842.1-201ENST00000597336 2039 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXA9P31269 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 AL590763.1-201ENST00000398297 1545 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 U3.7-201ENST00000363668 216 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXA9P31269 RN7SKP59-201ENST00000410520 314 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.06□□□□□ -1.44
HOXA9P31269 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXA9P31269 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.06□□□□□ -1.44
HOXA9P31269 AL731534.1-201ENST00000434711 269 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AL590399.4-201ENST00000436561 601 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 AC015983.1-201ENST00000441577 373 ntBASIC6.06□□□□□ -1.44
HOXA9P31269 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.06□□□□□ -1.44
HOXA9P31269 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 738.5 ms