Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.99□□□□□ -0.97
CLIP1P30622 CASC19-264ENST00000641912 1184 ntBASIC8.99□□□□□ -0.97
CLIP1P30622 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CLIP1P30622 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CLIP1P30622 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CLIP1P30622 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CLIP1P30622 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CLIP1P30622 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CLIP1P30622 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CLIP1P30622 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
CLIP1P30622 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CLIP1P30622 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CLIP1P30622 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CLIP1P30622 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8.99□□□□□ -0.97
CLIP1P30622 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.99□□□□□ -0.97
CLIP1P30622 ZNF969P-201ENST00000510345 2341 ntBASIC8.98□□□□□ -0.97
CLIP1P30622 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CLIP1P30622 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.98□□□□□ -0.97
CLIP1P30622 RNA5SP183-201ENST00000362452 119 ntBASIC8.98□□□□□ -0.97
CLIP1P30622 RNA5SP326-201ENST00000363209 110 ntBASIC8.98□□□□□ -0.97
CLIP1P30622 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.98□□□□□ -0.97
CLIP1P30622 LDHBP2-201ENST00000456969 1005 ntBASIC8.98□□□□□ -0.97
CLIP1P30622 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.98□□□□□ -0.97
CLIP1P30622 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.98□□□□□ -0.97
CLIP1P30622 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CLIP1P30622 AC068733.2-201ENST00000605434 1418 ntBASIC8.98□□□□□ -0.97
CLIP1P30622 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CLIP1P30622 CR383656.5-201ENST00000547616 1340 ntBASIC8.98□□□□□ -0.97
CLIP1P30622 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
CLIP1P30622 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.98□□□□□ -0.97
CLIP1P30622 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CLIP1P30622 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CLIP1P30622 RN7SKP28-201ENST00000364770 305 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 CDC123-202ENST00000378900 933 ntTSL 5 BASIC8.97□□□□□ -0.97
CLIP1P30622 SNORA70-201ENST00000384436 135 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CLIP1P30622 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.97□□□□□ -0.97
CLIP1P30622 AC092106.1-201ENST00000444291 373 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 EIF1P7-201ENST00000487533 337 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC8.97□□□□□ -0.97
CLIP1P30622 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC8.97□□□□□ -0.97
CLIP1P30622 AC021146.10-201ENST00000515628 706 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AP006245.2-201ENST00000522004 300 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.97□□□□□ -0.97
CLIP1P30622 NPM1P42-201ENST00000560329 862 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AGGF1P7-201ENST00000562369 913 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 DHFRP1-201ENST00000579682 559 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AF117829.2-201ENST00000619538 361 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8.97□□□□□ -0.97
CLIP1P30622 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
CLIP1P30622 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.97□□□□□ -0.97
CLIP1P30622 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 AC007342.5-201ENST00000571340 2142 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CLIP1P30622 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CLIP1P30622 GNG5P2-201ENST00000372054 207 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.97□□□□□ -0.97
CLIP1P30622 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.97□□□□□ -0.97
CLIP1P30622 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CLIP1P30622 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.97□□□□□ -0.97
CLIP1P30622 AC015720.2-201ENST00000567709 334 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
CLIP1P30622 FKBP1AP1-201ENST00000594588 318 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.97□□□□□ -0.97
CLIP1P30622 SUGT1P3-202ENST00000604259 383 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AL133481.2-203ENST00000607558 139 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AC005840.5-201ENST00000619166 599 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC8.97□□□□□ -0.97
CLIP1P30622 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.97□□□□□ -0.97
CLIP1P30622 CASC19-222ENST00000641321 1173 ntBASIC8.97□□□□□ -0.97
CLIP1P30622 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
CLIP1P30622 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.96□□□□□ -0.97
CLIP1P30622 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CLIP1P30622 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
CLIP1P30622 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.96□□□□□ -0.97
CLIP1P30622 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
CLIP1P30622 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.96□□□□□ -0.98
CLIP1P30622 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.96□□□□□ -0.98
CLIP1P30622 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CLIP1P30622 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CLIP1P30622 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.96□□□□□ -0.98
CLIP1P30622 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.96□□□□□ -0.98
CLIP1P30622 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.96□□□□□ -0.98
CLIP1P30622 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CLIP1P30622 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.96□□□□□ -0.98
CLIP1P30622 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
CLIP1P30622 AC005042.1-201ENST00000393397 800 ntBASIC8.96□□□□□ -0.98
CLIP1P30622 CNOT7P2-201ENST00000441051 832 ntBASIC8.96□□□□□ -0.98
CLIP1P30622 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.96□□□□□ -0.98
CLIP1P30622 RN7SL610P-201ENST00000463845 291 ntBASIC8.96□□□□□ -0.98
CLIP1P30622 AC093270.2-201ENST00000486157 792 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms