Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.06□□□□□ -1.6
USF1P22415 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 OR4A40P-201ENST00000533878 948 ntBASIC5.06□□□□□ -1.6
USF1P22415 AC090022.1-201ENST00000546569 311 ntBASIC5.06□□□□□ -1.6
USF1P22415 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.06□□□□□ -1.6
USF1P22415 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 AC090651.1-201ENST00000567865 634 ntBASIC5.06□□□□□ -1.6
USF1P22415 MIR3189-201ENST00000578735 73 ntBASIC5.06□□□□□ -1.6
USF1P22415 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.06□□□□□ -1.6
USF1P22415 SNORD95-201ENST00000579879 68 ntBASIC5.06□□□□□ -1.6
USF1P22415 AP001496.3-201ENST00000580230 913 ntBASIC5.06□□□□□ -1.6
USF1P22415 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 FAM72A-208ENST00000607379 1139 ntBASIC5.06□□□□□ -1.6
USF1P22415 AC022467.1-201ENST00000614738 749 ntBASIC5.06□□□□□ -1.6
USF1P22415 AC096861.1-201ENST00000616652 240 ntBASIC5.06□□□□□ -1.6
USF1P22415 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.06□□□□□ -1.6
USF1P22415 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.06□□□□□ -1.6
USF1P22415 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
USF1P22415 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
USF1P22415 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
USF1P22415 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USF1P22415 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USF1P22415 MIR375-201ENST00000362103 64 ntBASIC5.05□□□□□ -1.6
USF1P22415 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
USF1P22415 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.05□□□□□ -1.6
USF1P22415 U3.25-201ENST00000391209 220 ntBASIC5.05□□□□□ -1.6
USF1P22415 RANP7-201ENST00000418085 644 ntBASIC5.05□□□□□ -1.6
USF1P22415 BX323845.3-201ENST00000428215 527 ntBASIC5.05□□□□□ -1.6
USF1P22415 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.05□□□□□ -1.6
USF1P22415 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.05□□□□□ -1.6
USF1P22415 AC013410.1-201ENST00000436223 1232 ntBASIC5.05□□□□□ -1.6
USF1P22415 GAPDHP48-201ENST00000436626 961 ntBASIC5.05□□□□□ -1.6
USF1P22415 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.05□□□□□ -1.6
USF1P22415 BX679664.2-201ENST00000439282 283 ntBASIC5.05□□□□□ -1.6
USF1P22415 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.05□□□□□ -1.6
USF1P22415 GEMIN2P1-201ENST00000454246 752 ntBASIC5.05□□□□□ -1.6
USF1P22415 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.05□□□□□ -1.6
USF1P22415 AL355032.1-201ENST00000472981 438 ntBASIC5.05□□□□□ -1.6
USF1P22415 SNRPCP3-201ENST00000474888 476 ntBASIC5.05□□□□□ -1.6
USF1P22415 AC124945.1-201ENST00000485133 188 ntBASIC5.05□□□□□ -1.6
USF1P22415 IGKV2-19-201ENST00000518132 283 ntBASIC5.05□□□□□ -1.6
USF1P22415 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.05□□□□□ -1.6
USF1P22415 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.05□□□□□ -1.6
USF1P22415 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.05□□□□□ -1.6
USF1P22415 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
USF1P22415 AC022404.1-201ENST00000555320 273 ntBASIC5.05□□□□□ -1.6
USF1P22415 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USF1P22415 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.05□□□□□ -1.6
USF1P22415 FAM27E4-201ENST00000605259 342 ntBASIC5.05□□□□□ -1.6
USF1P22415 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USF1P22415 AC141002.1-201ENST00000607025 279 ntBASIC5.05□□□□□ -1.6
USF1P22415 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.05□□□□□ -1.6
USF1P22415 AC003992.1-201ENST00000635364 557 ntBASIC5.05□□□□□ -1.6
USF1P22415 OR7A1P-202ENST00000641542 1158 ntBASIC5.05□□□□□ -1.6
USF1P22415 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
USF1P22415 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
USF1P22415 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.05□□□□□ -1.6
USF1P22415 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.05□□□□□ -1.6
USF1P22415 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USF1P22415 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
USF1P22415 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
USF1P22415 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USF1P22415 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USF1P22415 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.04□□□□□ -1.6
USF1P22415 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
USF1P22415 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 AC096921.2-201ENST00000561507 1916 ntBASIC5.04□□□□□ -1.6
USF1P22415 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
USF1P22415 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
USF1P22415 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.04□□□□□ -1.6
USF1P22415 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USF1P22415 RNU1-150P-201ENST00000362491 162 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms