Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFRAP16234 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFRAP16234 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDGFRAP16234 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AC016739.1-201ENST00000405359 345 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFRAP16234 BX119904.3-201ENST00000428194 957 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDGFRAP16234 RPL12P11-201ENST00000439970 501 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 AC023141.8-201ENST00000442554 208 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFRAP16234 ACA64.1-201ENST00000459171 127 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 AC079080.1-201ENST00000479841 822 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AC113398.2-201ENST00000507630 558 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 SCARNA18.1-201ENST00000516330 83 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 AC078899.1-201ENST00000521432 1185 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AC010547.7-201ENST00000570323 333 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 MIR4310-201ENST00000582950 57 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AC006115.2-201ENST00000596823 202 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFRAP16234 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AC096586.2-201ENST00000610260 441 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 MIR6793-201ENST00000612376 63 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 AL139099.4-201ENST00000614802 114 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFRAP16234 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFRAP16234 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PDGFRAP16234 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFRAP16234 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PDGFRAP16234 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.16□□□□□ -1.42
PDGFRAP16234 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFRAP16234 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFRAP16234 AC239868.2-201ENST00000564237 4527 ntBASIC6.16□□□□□ -1.42
PDGFRAP16234 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFRAP16234 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFRAP16234 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFRAP16234 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFRAP16234 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFRAP16234 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFRAP16234 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFRAP16234 OR7E25P-201ENST00000344844 931 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFRAP16234 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 HMGN1P20-201ENST00000411849 300 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 MTND4LP21-201ENST00000415303 295 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 RPS3P2-201ENST00000421346 701 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 CDY8P-201ENST00000428380 1279 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 RPL12P16-201ENST00000431098 498 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 VN1R110P-201ENST00000438988 971 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFRAP16234 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PDGFRAP16234 CDY20P-201ENST00000447528 1279 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AC090568.1-201ENST00000509499 856 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFRAP16234 KCTD9P6-201ENST00000522306 950 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 TRIM51DP-201ENST00000529746 596 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFRAP16234 NPM1P42-201ENST00000560329 862 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFRAP16234 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AC129915.3-201ENST00000634128 948 ntBASIC6.15□□□□□ -1.42
PDGFRAP16234 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFRAP16234 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PDGFRAP16234 AL929601.4-201ENST00000613011 1341 ntBASIC6.15□□□□□ -1.43
PDGFRAP16234 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.15□□□□□ -1.43
PDGFRAP16234 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFRAP16234 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFRAP16234 AC027088.4-201ENST00000611559 1947 ntBASIC6.15□□□□□ -1.43
PDGFRAP16234 MSL3P1-202ENST00000440028 1468 ntBASIC6.15□□□□□ -1.43
PDGFRAP16234 PROS2P-201ENST00000474651 1951 ntBASIC6.15□□□□□ -1.43
PDGFRAP16234 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
PDGFRAP16234 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFRAP16234 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms