Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.11□□□□□ -1.43
KRT3P12035 AC060780.2-201ENST00000589047 198 ntBASIC6.11□□□□□ -1.43
KRT3P12035 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.11□□□□□ -1.43
KRT3P12035 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
KRT3P12035 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
KRT3P12035 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.1□□□□□ -1.43
KRT3P12035 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.1□□□□□ -1.43
KRT3P12035 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.1□□□□□ -1.43
KRT3P12035 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
KRT3P12035 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 RNA5SP477-201ENST00000362639 119 ntBASIC6.1□□□□□ -1.43
KRT3P12035 METTL15P3-201ENST00000415522 1221 ntBASIC6.1□□□□□ -1.43
KRT3P12035 AC013410.1-201ENST00000436223 1232 ntBASIC6.1□□□□□ -1.43
KRT3P12035 NDUFS5P5-201ENST00000437256 321 ntBASIC6.1□□□□□ -1.43
KRT3P12035 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.1□□□□□ -1.43
KRT3P12035 AC135999.1-201ENST00000478962 479 ntBASIC6.1□□□□□ -1.43
KRT3P12035 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.1□□□□□ -1.43
KRT3P12035 RPL37P23-201ENST00000492641 294 ntBASIC6.1□□□□□ -1.43
KRT3P12035 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 AC105384.2-201ENST00000508433 640 ntBASIC6.1□□□□□ -1.43
KRT3P12035 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.1□□□□□ -1.43
KRT3P12035 Y_RNA.667-201ENST00000516212 107 ntBASIC6.1□□□□□ -1.43
KRT3P12035 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.1□□□□□ -1.43
KRT3P12035 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.1□□□□□ -1.43
KRT3P12035 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.1□□□□□ -1.43
KRT3P12035 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 NLRP3P1-201ENST00000622303 1785 ntBASIC6.1□□□□□ -1.43
KRT3P12035 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
KRT3P12035 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
KRT3P12035 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.09□□□□□ -1.43
KRT3P12035 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.09□□□□□ -1.43
KRT3P12035 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT3P12035 AL158152.1-201ENST00000602652 1435 ntBASIC6.09□□□□□ -1.43
KRT3P12035 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 AC011933.2-201ENST00000578539 2790 ntBASIC6.09□□□□□ -1.43
KRT3P12035 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
KRT3P12035 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
KRT3P12035 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 TMSB4XP2-201ENST00000335179 210 ntBASIC6.09□□□□□ -1.43
KRT3P12035 RNA5SP433-201ENST00000364491 114 ntBASIC6.09□□□□□ -1.43
KRT3P12035 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
KRT3P12035 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 RNA5SP91-201ENST00000390902 119 ntBASIC6.09□□□□□ -1.43
KRT3P12035 VN1R21P-201ENST00000426703 765 ntBASIC6.09□□□□□ -1.43
KRT3P12035 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.09□□□□□ -1.43
KRT3P12035 AC126120.1-201ENST00000431082 470 ntBASIC6.09□□□□□ -1.43
KRT3P12035 OR6C71P-201ENST00000432580 913 ntBASIC6.09□□□□□ -1.43
KRT3P12035 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT3P12035 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT3P12035 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT3P12035 AC093166.4-201ENST00000457867 318 ntBASIC6.09□□□□□ -1.43
KRT3P12035 RN7SL741P-201ENST00000482473 289 ntBASIC6.09□□□□□ -1.43
KRT3P12035 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT3P12035 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.09□□□□□ -1.43
KRT3P12035 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT3P12035 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.09□□□□□ -1.43
KRT3P12035 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 MIR4271-201ENST00000582451 67 ntBASIC6.09□□□□□ -1.43
KRT3P12035 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.09□□□□□ -1.43
KRT3P12035 RPL12P48-201ENST00000605620 304 ntBASIC6.09□□□□□ -1.43
KRT3P12035 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.09□□□□□ -1.43
KRT3P12035 AC129778.1-202ENST00000623812 261 ntBASIC6.09□□□□□ -1.43
KRT3P12035 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.09□□□□□ -1.43
KRT3P12035 AL591379.1-207ENST00000635982 261 ntBASIC6.09□□□□□ -1.43
KRT3P12035 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.09□□□□□ -1.43
KRT3P12035 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.09□□□□□ -1.43
KRT3P12035 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRT3P12035 AC232271.1-201ENST00000602455 2715 ntBASIC6.09□□□□□ -1.43
KRT3P12035 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.09□□□□□ -1.43
KRT3P12035 WDR95P-201ENST00000425638 1542 ntBASIC6.09□□□□□ -1.44
KRT3P12035 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
KRT3P12035 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.09□□□□□ -1.44
KRT3P12035 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
KRT3P12035 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.09□□□□□ -1.44
KRT3P12035 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT3P12035 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms