Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.2□□□□□ -1.58
FREM3P0C091 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 AL161912.4-201ENST00000623889 2468 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 OR10R3P-201ENST00000361688 942 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 AL133173.1-201ENST00000423458 397 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 AC138866.2-201ENST00000508650 584 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.19□□□□□ -1.58
FREM3P0C091 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.19□□□□□ -1.58
FREM3P0C091 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.19□□□□□ -1.58
FREM3P0C091 AC139697.1-201ENST00000548429 745 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.19□□□□□ -1.58
FREM3P0C091 MRPS21P9-201ENST00000571150 257 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.19□□□□□ -1.58
FREM3P0C091 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.19□□□□□ -1.58
FREM3P0C091 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
FREM3P0C091 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
FREM3P0C091 CASC19-248ENST00000641674 1356 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FREM3P0C091 AC138907.8-201ENST00000623981 2256 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 AP002833.3-201ENST00000625075 2265 ntBASIC5.19□□□□□ -1.58
FREM3P0C091 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.18□□□□□ -1.58
FREM3P0C091 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 OR2AT2P-201ENST00000413438 905 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.18□□□□□ -1.58
FREM3P0C091 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.18□□□□□ -1.58
FREM3P0C091 RN7SL570P-201ENST00000484405 292 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 UBA52P7-201ENST00000486088 380 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 TMEM97P2-201ENST00000517841 403 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.18□□□□□ -1.58
FREM3P0C091 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.18□□□□□ -1.58
FREM3P0C091 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 AC006115.2-201ENST00000596823 202 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.18□□□□□ -1.58
FREM3P0C091 AL357153.4-201ENST00000620487 1016 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
FREM3P0C091 AC015799.1-201ENST00000622996 3122 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.18□□□□□ -1.58
FREM3P0C091 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.18□□□□□ -1.58
FREM3P0C091 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
FREM3P0C091 RNA5SP326-201ENST00000363209 110 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.18□□□□□ -1.58
FREM3P0C091 NME1P1-201ENST00000420914 382 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 RPS3AP38-201ENST00000435889 763 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 AL390879.1-201ENST00000439143 386 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 RPL38P3-201ENST00000484463 213 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.18□□□□□ -1.58
FREM3P0C091 HNRNPCP1-201ENST00000556181 766 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.18□□□□□ -1.58
FREM3P0C091 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.18□□□□□ -1.58
FREM3P0C091 AL133481.2-203ENST00000607558 139 ntBASIC5.18□□□□□ -1.58
FREM3P0C091 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.18□□□□□ -1.58
FREM3P0C091 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FREM3P0C091 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
FREM3P0C091 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
FREM3P0C091 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms