Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 NRBF2P4-201ENST00000520874 850 ntBASIC6.46□□□□□ -1.38
MMP3P08254 AC025857.1-201ENST00000525252 377 ntBASIC6.46□□□□□ -1.38
MMP3P08254 AP003168.1-201ENST00000530091 307 ntBASIC6.46□□□□□ -1.38
MMP3P08254 AC009303.3-201ENST00000591103 736 ntBASIC6.46□□□□□ -1.38
MMP3P08254 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MMP3P08254 AC063977.5-201ENST00000601044 974 ntBASIC6.46□□□□□ -1.38
MMP3P08254 AL021707.7-201ENST00000607991 416 ntBASIC6.46□□□□□ -1.38
MMP3P08254 AL162574.2-201ENST00000614618 657 ntBASIC6.46□□□□□ -1.38
MMP3P08254 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.46□□□□□ -1.38
MMP3P08254 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
MMP3P08254 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
MMP3P08254 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
MMP3P08254 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
MMP3P08254 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.45□□□□□ -1.38
MMP3P08254 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MMP3P08254 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.45□□□□□ -1.38
MMP3P08254 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.45□□□□□ -1.38
MMP3P08254 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
MMP3P08254 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 RNA5SP131-201ENST00000365452 119 ntBASIC6.45□□□□□ -1.38
MMP3P08254 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MMP3P08254 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 RN7SKP59-201ENST00000410520 314 ntBASIC6.45□□□□□ -1.38
MMP3P08254 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.45□□□□□ -1.38
MMP3P08254 OR5W1P-201ENST00000423705 938 ntBASIC6.45□□□□□ -1.38
MMP3P08254 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.45□□□□□ -1.38
MMP3P08254 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 RSL24D1P8-201ENST00000434442 492 ntBASIC6.45□□□□□ -1.38
MMP3P08254 AC015983.1-201ENST00000441577 373 ntBASIC6.45□□□□□ -1.38
MMP3P08254 NDUFA5P8-201ENST00000449019 346 ntBASIC6.45□□□□□ -1.38
MMP3P08254 AC011225.1-201ENST00000457751 369 ntBASIC6.45□□□□□ -1.38
MMP3P08254 RPL35AP19-201ENST00000469425 329 ntBASIC6.45□□□□□ -1.38
MMP3P08254 COPS8P2-201ENST00000473228 627 ntBASIC6.45□□□□□ -1.38
MMP3P08254 UBA52P7-201ENST00000486088 380 ntBASIC6.45□□□□□ -1.38
MMP3P08254 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.45□□□□□ -1.38
MMP3P08254 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.45□□□□□ -1.38
MMP3P08254 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.45□□□□□ -1.38
MMP3P08254 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.45□□□□□ -1.38
MMP3P08254 AC096996.1-201ENST00000563813 325 ntBASIC6.45□□□□□ -1.38
MMP3P08254 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.45□□□□□ -1.38
MMP3P08254 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.45□□□□□ -1.38
MMP3P08254 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.45□□□□□ -1.38
MMP3P08254 AC008536.1-201ENST00000602872 669 ntBASIC6.45□□□□□ -1.38
MMP3P08254 IMMP1LP3-201ENST00000604197 224 ntBASIC6.45□□□□□ -1.38
MMP3P08254 CYCSP1-201ENST00000604815 315 ntBASIC6.45□□□□□ -1.38
MMP3P08254 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.45□□□□□ -1.38
MMP3P08254 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
MMP3P08254 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.45□□□□□ -1.38
MMP3P08254 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 AC235565.1-201ENST00000456962 1325 ntBASIC6.45□□□□□ -1.38
MMP3P08254 IMMTP1-201ENST00000435590 2219 ntBASIC6.45□□□□□ -1.38
MMP3P08254 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MMP3P08254 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
MMP3P08254 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 AC006511.3-201ENST00000624929 1783 ntBASIC6.44□□□□□ -1.38
MMP3P08254 MAPK10-261ENST00000641050 3109 ntBASIC6.44□□□□□ -1.38
MMP3P08254 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 MFSD8-219ENST00000641228 2559 ntBASIC6.44□□□□□ -1.38
MMP3P08254 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.44□□□□□ -1.38
MMP3P08254 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.44□□□□□ -1.38
MMP3P08254 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MMP3P08254 RNU6-171P-201ENST00000384354 107 ntBASIC6.44□□□□□ -1.38
MMP3P08254 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.44□□□□□ -1.38
MMP3P08254 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.44□□□□□ -1.38
MMP3P08254 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.44□□□□□ -1.38
MMP3P08254 AC019205.1-201ENST00000421830 730 ntBASIC6.44□□□□□ -1.38
MMP3P08254 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.44□□□□□ -1.38
MMP3P08254 AL450996.1-201ENST00000445574 1202 ntBASIC6.44□□□□□ -1.38
MMP3P08254 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.44□□□□□ -1.38
MMP3P08254 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.44□□□□□ -1.38
MMP3P08254 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.44□□□□□ -1.38
MMP3P08254 RN7SL515P-201ENST00000463999 297 ntBASIC6.44□□□□□ -1.38
MMP3P08254 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.44□□□□□ -1.38
MMP3P08254 AC087672.1-201ENST00000479876 766 ntBASIC6.44□□□□□ -1.38
MMP3P08254 RN7SL547P-201ENST00000490793 290 ntBASIC6.44□□□□□ -1.38
MMP3P08254 AL133372.1-201ENST00000493565 745 ntBASIC6.44□□□□□ -1.38
MMP3P08254 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.44□□□□□ -1.38
MMP3P08254 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.44□□□□□ -1.38
MMP3P08254 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.44□□□□□ -1.38
MMP3P08254 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.44□□□□□ -1.38
MMP3P08254 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.44□□□□□ -1.38
MMP3P08254 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.44□□□□□ -1.38
MMP3P08254 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.44□□□□□ -1.38
MMP3P08254 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms