Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC007136.1-201ENST00000589141 199 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AL356055.1-201ENST00000602528 446 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AC015871.2-201ENST00000603605 948 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AC073348.1-201ENST00000623002 331 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AC005609.2-201ENST00000623320 592 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.14□□□□□ -1.27
PDGFAP04085 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
PDGFAP04085 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
PDGFAP04085 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 OR2AH1P-202ENST00000641232 2744 ntBASIC7.14□□□□□ -1.27
PDGFAP04085 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PDGFAP04085 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 AL591543.1-202ENST00000642095 4149 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
PDGFAP04085 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.13□□□□□ -1.27
PDGFAP04085 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 UGT2B25P-201ENST00000511504 1586 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC011447.7-201ENST00000624228 1590 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PDGFAP04085 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 RPL11P4-201ENST00000332269 436 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 RNA5SP218-201ENST00000363188 109 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 RNU6-501P-201ENST00000364072 100 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 RNU5A-6P-201ENST00000384136 116 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 MIR181A1-201ENST00000385026 110 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AL139100.1-201ENST00000408001 498 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC127537.1-201ENST00000418183 748 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 MTND3P23-201ENST00000431980 347 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 UBE2V1P3-201ENST00000439651 417 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 RPL31P44-201ENST00000447680 377 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 NANOGNBP1-201ENST00000448444 480 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 PAXBP1P1-201ENST00000449315 447 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 RBMY3AP-201ENST00000449381 1145 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC073476.1-201ENST00000452854 407 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC087385.2-201ENST00000477729 498 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 RN7SL705P-201ENST00000481678 294 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
PDGFAP04085 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.13□□□□□ -1.27
PDGFAP04085 IGHV3-32-201ENST00000519182 355 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.13□□□□□ -1.27
PDGFAP04085 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 NPM1P47-201ENST00000560843 856 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC096708.2-201ENST00000577676 512 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.13□□□□□ -1.27
PDGFAP04085 MIR378H-201ENST00000579966 83 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.13□□□□□ -1.27
PDGFAP04085 SS18L2P2-201ENST00000583960 235 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC024560.3-201ENST00000608482 349 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC091304.9-201ENST00000612091 226 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC092794.2-201ENST00000620933 563 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC009120.7-201ENST00000623452 780 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC106782.7-201ENST00000624024 418 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 AC133555.5-201ENST00000624430 418 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC006213.6-201ENST00000623722 4179 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
PDGFAP04085 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
PDGFAP04085 AC092821.2-201ENST00000545710 2042 ntBASIC7.13□□□□□ -1.27
PDGFAP04085 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PDGFAP04085 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
PDGFAP04085 MTND5P26-201ENST00000426018 1752 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms