Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC093166.4-201ENST00000457867 318 ntBASIC6.23□□□□□ -1.41
O00370 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
O00370 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.23□□□□□ -1.41
O00370 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.23□□□□□ -1.41
O00370 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.23□□□□□ -1.41
O00370 AC090424.1-201ENST00000535243 736 ntBASIC6.23□□□□□ -1.41
O00370 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.23□□□□□ -1.41
O00370 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.23□□□□□ -1.41
O00370 AC067773.1-201ENST00000603284 1094 ntBASIC6.23□□□□□ -1.41
O00370 AL359742.1-201ENST00000622497 540 ntBASIC6.23□□□□□ -1.41
O00370 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.23□□□□□ -1.41
O00370 MIR1910-201ENST00000636955 80 ntBASIC6.23□□□□□ -1.41
O00370 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
O00370 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
O00370 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
O00370 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
O00370 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
O00370 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.22□□□□□ -1.41
O00370 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
O00370 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
O00370 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
O00370 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.22□□□□□ -1.41
O00370 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 RNU6-167P-201ENST00000384292 106 ntBASIC6.22□□□□□ -1.41
O00370 MIR1203-201ENST00000408812 85 ntBASIC6.22□□□□□ -1.41
O00370 NME1P1-201ENST00000420914 382 ntBASIC6.22□□□□□ -1.41
O00370 BX323845.3-201ENST00000428215 527 ntBASIC6.22□□□□□ -1.41
O00370 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
O00370 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.22□□□□□ -1.41
O00370 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.22□□□□□ -1.41
O00370 RN7SL57P-201ENST00000493687 290 ntBASIC6.22□□□□□ -1.41
O00370 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.22□□□□□ -1.41
O00370 NPM1P21-201ENST00000513394 762 ntBASIC6.22□□□□□ -1.41
O00370 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.22□□□□□ -1.41
O00370 AP000648.1-201ENST00000529682 397 ntBASIC6.22□□□□□ -1.41
O00370 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
O00370 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 AC006115.2-201ENST00000596823 202 ntBASIC6.22□□□□□ -1.41
O00370 AL138895.2-201ENST00000603019 178 ntBASIC6.22□□□□□ -1.41
O00370 AL031601.1-201ENST00000605702 394 ntBASIC6.22□□□□□ -1.41
O00370 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.22□□□□□ -1.41
O00370 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
O00370 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 AP000550.3-201ENST00000637734 379 ntBASIC6.22□□□□□ -1.41
O00370 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
O00370 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
O00370 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
O00370 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
O00370 ICE2P1-201ENST00000512800 1849 ntBASIC6.22□□□□□ -1.41
O00370 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
O00370 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.22□□□□□ -1.41
O00370 AC138907.8-201ENST00000623981 2256 ntBASIC6.22□□□□□ -1.41
O00370 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
O00370 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
O00370 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.21□□□□□ -1.42
O00370 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.21□□□□□ -1.42
O00370 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 OR7E25P-201ENST00000344844 931 ntBASIC6.21□□□□□ -1.42
O00370 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
O00370 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 RN7SKP29-201ENST00000410957 272 ntBASIC6.21□□□□□ -1.42
O00370 AL158827.1-201ENST00000416300 391 ntBASIC6.21□□□□□ -1.42
O00370 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.21□□□□□ -1.42
O00370 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.21□□□□□ -1.42
O00370 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.21□□□□□ -1.42
O00370 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.21□□□□□ -1.42
O00370 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.21□□□□□ -1.42
O00370 AC004129.2-201ENST00000457229 287 ntBASIC6.21□□□□□ -1.42
O00370 AC090602.1-201ENST00000469695 252 ntBASIC6.21□□□□□ -1.42
O00370 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.21□□□□□ -1.42
O00370 AC114781.3-201ENST00000512083 142 ntBASIC6.21□□□□□ -1.42
O00370 snoU109.5-201ENST00000516231 132 ntBASIC6.21□□□□□ -1.42
O00370 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.21□□□□□ -1.42
O00370 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.21□□□□□ -1.42
O00370 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.21□□□□□ -1.42
O00370 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.21□□□□□ -1.42
O00370 NANOGNBP2-201ENST00000544753 553 ntBASIC6.21□□□□□ -1.42
O00370 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.21□□□□□ -1.42
O00370 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms