Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 AC099654.6-201ENST00000636487 512 ntBASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 U6.107-201ENST00000637108 79 ntBASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
VPS9D1Q9Y2B5 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL049697.2-201ENST00000403708 294 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 MIR1296-201ENST00000408136 92 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL603650.1-201ENST00000412680 240 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 CNOT4P1-201ENST00000417432 1199 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 MTATP6P18-201ENST00000417994 673 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC006509.1-201ENST00000420788 634 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 RPS7P14-201ENST00000426405 583 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 NPM1P34-201ENST00000428821 893 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC096644.2-201ENST00000429278 159 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 RPL12P14-201ENST00000431782 490 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 GAPDHP56-201ENST00000506031 988 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 PCBP2P3-201ENST00000509726 843 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 RNU6-1143P-201ENST00000516125 104 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 Y_RNA.668-201ENST00000516233 93 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC073913.2-201ENST00000541512 145 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 RN7SL804P-201ENST00000582466 298 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 RPL10P15-201ENST00000585756 315 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 HMGN1P30-201ENST00000589286 268 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL022345.1-201ENST00000607292 135 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 FAM30B-201ENST00000611556 397 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC015922.4-201ENST00000612568 690 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 MIR8075-201ENST00000614354 80 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AF121897.1-201ENST00000411867 3980 ntBASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS9D1Q9Y2B5 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 NSRP1P1-201ENST00000444067 1693 ntBASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 AC012618.3-205ENST00000637896 1496 ntBASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
VPS9D1Q9Y2B5 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms