Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 AL359955.1-201ENST00000455242 3275 ntBASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 OR4G1P-202ENST00000641173 1788 ntBASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 RARSP1-201ENST00000542842 1418 ntBASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 CR383656.5-201ENST00000547616 1340 ntBASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HDAC6Q9UBN7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RNU105B-201ENST00000364478 208 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RNU11-6P-201ENST00000391127 133 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RPS15AP30-201ENST00000420976 390 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 OR5W1P-201ENST00000423705 938 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC079922.1-201ENST00000443291 359 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 REG1CP-206ENST00000447469 496 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 NPM1P19-201ENST00000450070 712 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC016027.4-201ENST00000450866 277 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RPS27AP2-201ENST00000457576 465 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AL445687.2-201ENST00000458156 728 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC073594.1-201ENST00000462065 364 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RNA5SP400-201ENST00000517155 111 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 TMEM97P2-201ENST00000517841 403 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RPL12P48-201ENST00000605620 304 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AL021368.1-201ENST00000607490 540 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC022467.1-201ENST00000614738 749 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AL049767.1-202ENST00000637826 242 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 AC012254.3-201ENST00000591183 2117 ntBASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC6Q9UBN7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC140479.2-201ENST00000421567 3130 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 U3.25-201ENST00000391209 220 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 RPL23AP17-201ENST00000401064 499 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AL121835.1-201ENST00000404250 354 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 RPS3AP2-201ENST00000407190 754 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AL513325.1-201ENST00000417716 1034 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 YWHAEP1-201ENST00000453697 763 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 RPSAP39-201ENST00000467439 883 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC124945.1-201ENST00000485133 188 ntBASIC6.72□□□□□ -1.33
HDAC6Q9UBN7 AC114728.1-201ENST00000488289 483 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms