Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
USP35Q9P2H5 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.52□□□□□ -1.05
USP35Q9P2H5 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC110792.3-201ENST00000595906 1614 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 RN7SKP292-201ENST00000365522 317 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC019205.1-201ENST00000421830 730 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC007000.2-201ENST00000442564 487 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AL627224.1-201ENST00000448334 444 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 MYO5BP2-201ENST00000449815 1277 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC011476.1-201ENST00000466725 307 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 SUMO2P4-201ENST00000504193 276 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 SSX6-203ENST00000509958 336 ntTSL 3 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 RN7SKP67-201ENST00000515905 235 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC004232.1-201ENST00000571388 208 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 SDR42E1P1-201ENST00000611327 477 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AL354718.1-201ENST00000619764 589 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC021766.1-201ENST00000624404 741 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 5S_rRNA.28-201ENST00000638107 119 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC008627.1-201ENST00000517511 1704 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
USP35Q9P2H5 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USP35Q9P2H5 SAGE3P-201ENST00000619800 1635 ntBASIC8.51□□□□□ -1.05
USP35Q9P2H5 AC093297.3-201ENST00000607056 2517 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
USP35Q9P2H5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
USP35Q9P2H5 AC025809.2-201ENST00000625085 1802 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 AL591848.4-201ENST00000567832 3472 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
USP35Q9P2H5 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 AL121977.1-201ENST00000401636 979 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 AL356057.1-202ENST00000402263 756 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 BTF3P9-201ENST00000418784 283 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 PTP4A1P1-201ENST00000420539 515 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 RPL34P33-201ENST00000486062 334 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 OR9N1P-202ENST00000494289 481 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 AP001804.1-201ENST00000526868 919 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 BMS1P7-201ENST00000602440 1052 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 KATNBL1P5-201ENST00000605015 517 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 MIR6798-201ENST00000612887 67 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 AP005431.1-201ENST00000618479 319 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 AL138960.2-201ENST00000625145 535 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
USP35Q9P2H5 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
USP35Q9P2H5 AL731556.1-201ENST00000394628 3711 ntBASIC8.5□□□□□ -1.05
USP35Q9P2H5 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USP35Q9P2H5 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.49□□□□□ -1.05
USP35Q9P2H5 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USP35Q9P2H5 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
USP35Q9P2H5 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
USP35Q9P2H5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.49□□□□□ -1.05
USP35Q9P2H5 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
USP35Q9P2H5 RNFT1P3-201ENST00000340898 1052 ntBASIC8.49□□□□□ -1.05
USP35Q9P2H5 AL157884.1-201ENST00000424561 454 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms