Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 RN7SKP59-201ENST00000410520 314 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 RPL35AP24-201ENST00000413846 330 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 RPS4XP5-201ENST00000419038 768 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC019205.1-201ENST00000421830 730 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 FTLP8-201ENST00000446770 267 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 RNU1-88P-201ENST00000459274 128 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 CCDC11P1-201ENST00000503137 1162 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AC096996.1-201ENST00000563813 325 ntBASIC5.52□□□□□ -1.53
CCDC88CQ9P219 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC88CQ9P219 AL049634.1-201ENST00000453770 1720 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 U3.2-201ENST00000362981 210 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 RPL7P58-201ENST00000402913 758 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 SNORA11B-201ENST00000408175 129 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 AC127526.2-201ENST00000426436 775 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 OR7E116P-201ENST00000448529 957 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 UBA52P7-201ENST00000486088 380 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 RN7SL629P-201ENST00000489622 285 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 CYCSP22-201ENST00000517555 339 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 AC245014.3-201ENST00000618589 347 ntBASIC5.51□□□□□ -1.53
CCDC88CQ9P219 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC88CQ9P219 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 RNA5SP435-201ENST00000364044 108 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC093155.2-201ENST00000420734 937 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL662874.1-201ENST00000426065 230 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL445928.1-201ENST00000435545 222 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 OR2AF1P-201ENST00000454899 889 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC008638.1-201ENST00000506035 866 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 TOMM22P4-201ENST00000511318 336 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 SCARNA21.2-201ENST00000516600 166 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 MIR4489-201ENST00000578869 62 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC011445.2-201ENST00000599274 173 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL133481.2-203ENST00000607558 139 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 MAPK10-350ENST00000641777 965 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 AC130304.1-201ENST00000622942 2385 ntBASIC5.5□□□□□ -1.53
CCDC88CQ9P219 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC88CQ9P219 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms