Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC011416.1-201ENST00000514947 1732 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7□□□□□ -1.29
VTA1Q9NP79 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
VTA1Q9NP79 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7□□□□□ -1.29
VTA1Q9NP79 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 AC008957.3-201ENST00000624112 2242 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
VTA1Q9NP79 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 RNFT1P3-201ENST00000340898 1052 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 RNU6-1251P-201ENST00000364502 107 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 RNA5SP284-201ENST00000384547 118 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 AL606495.1-201ENST00000422100 813 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 MTND6P12-201ENST00000428247 522 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 RPL12P16-201ENST00000431098 498 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 AL645931.1-201ENST00000439737 410 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 SNX18P26-201ENST00000458433 740 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7□□□□□ -1.29
VTA1Q9NP79 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 AC026254.2-201ENST00000475295 371 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 AC023818.1-201ENST00000498379 384 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 NPM1P27-201ENST00000502784 830 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 SUMO2P7-201ENST00000511179 285 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7□□□□□ -1.29
VTA1Q9NP79 SNORD46.2-201ENST00000516021 102 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 RNA5SP438-201ENST00000516561 112 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7□□□□□ -1.29
VTA1Q9NP79 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7□□□□□ -1.29
VTA1Q9NP79 GTF2IP11-201ENST00000526931 420 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7□□□□□ -1.29
VTA1Q9NP79 AL121579.2-201ENST00000555466 590 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 YWHAZP1-201ENST00000556286 722 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 AP005119.1-201ENST00000580956 292 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 PLEKHA3P1-201ENST00000598554 894 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7□□□□□ -1.29
VTA1Q9NP79 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 AC004808.1-201ENST00000627671 721 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 AC022325.1-201ENST00000502748 2199 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7□□□□□ -1.29
VTA1Q9NP79 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7□□□□□ -1.29
VTA1Q9NP79 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7□□□□□ -1.29
VTA1Q9NP79 MAPK10-287ENST00000641217 3037 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VTA1Q9NP79 AL627171.1-201ENST00000618845 1308 ntBASIC7□□□□□ -1.29
VTA1Q9NP79 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
VTA1Q9NP79 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC091305.2-201ENST00000624049 1576 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 RNU1-24P-201ENST00000364285 165 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 RNA5SP478-201ENST00000364657 115 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 RN7SKP81-201ENST00000365603 331 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC005522.1-201ENST00000395416 346 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AL096800.1-201ENST00000405326 893 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AL138787.1-202ENST00000437804 898 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 FTLP8-201ENST00000446770 267 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 RPL31P15-201ENST00000449770 338 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC092865.4-201ENST00000477936 615 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC106872.4-201ENST00000510050 523 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms