Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 GAPDHP62-201ENST00000515313 990 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RNA5SP206-201ENST00000516703 121 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RNU4-18P-201ENST00000516751 149 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC022616.2-201ENST00000523185 300 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC135983.3-201ENST00000528049 1226 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC037479.1-201ENST00000558361 625 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 MIR378H-201ENST00000579966 83 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC090241.1-201ENST00000587732 621 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AL159169.2-201ENST00000610061 1269 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC074140.1-201ENST00000621617 208 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC068213.1-201ENST00000625124 226 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02019-201ENST00000608605 2060 ntBASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC092681.1-201ENST00000297369 291 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 RNA5SP211-201ENST00000365516 117 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL157702.1-201ENST00000398764 426 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL117344.1-201ENST00000407196 616 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL033519.1-201ENST00000407266 307 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 GPS2P1-201ENST00000411761 986 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL096829.1-201ENST00000413677 457 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 VN1R3-201ENST00000418822 919 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC006509.1-201ENST00000420788 634 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC096775.1-201ENST00000437724 448 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC096632.2-201ENST00000438139 1239 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL359265.1-201ENST00000440296 795 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC016027.4-201ENST00000450866 277 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 NPM1P9-201ENST00000453156 844 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 RN7SL39P-201ENST00000462264 297 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 RPL34P33-201ENST00000486062 334 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC021146.10-201ENST00000515628 706 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 SNORA70.11-201ENST00000515987 138 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 SNORA70.13-201ENST00000516116 138 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC138832.1-201ENST00000522871 556 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 OR4A42P-201ENST00000531397 938 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AP001804.2-201ENST00000533932 910 ntBASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SND1-IT1Q9HBX3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms