Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RN7SL382P-201ENST00000482631 282 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC068522.1-201ENST00000482895 345 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC004815.1-201ENST00000484185 331 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 RPL9P15-201ENST00000491096 532 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC018639.1-201ENST00000492994 442 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 ABCA11P-202ENST00000504019 2110 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC106800.2-201ENST00000514009 1103 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 DCAF13P2-201ENST00000514188 555 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC011352.2-201ENST00000514574 1016 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC138938.1-201ENST00000515431 782 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 RNU6-759P-201ENST00000516740 103 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 RBMS2P1-201ENST00000525031 1226 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AP006587.5-201ENST00000532033 739 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 GARSP1-201ENST00000570895 719 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC022069.1-201ENST00000582910 658 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 OR7E19P-202ENST00000589942 844 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AP001981.2-201ENST00000603241 418 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 DPRXP5-201ENST00000604662 539 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL139286.2-201ENST00000606838 396 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL121890.3-201ENST00000618494 516 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SEC61A2Q9H9S3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SEC61A2Q9H9S3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
SEC61A2Q9H9S3 AL596244.1-201ENST00000567068 3779 ntBASIC6.09□□□□□ -1.44
SEC61A2Q9H9S3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SEC61A2Q9H9S3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AL049737.1-201ENST00000413920 1403 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AL022323.4-201ENST00000623980 13120 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 Y_RNA.77-201ENST00000362962 107 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 RNU6-1331P-201ENST00000363658 106 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 Y_RNA.559-201ENST00000384686 107 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 Y_RNA.578-201ENST00000390903 88 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 RPL7P27-201ENST00000403775 720 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 MTND4LP21-201ENST00000415303 295 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 RPL30P16-201ENST00000419341 429 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 NANOGP2-201ENST00000435391 727 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 FGF7P5-201ENST00000441829 291 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 MTND5P2-201ENST00000442927 1142 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 VN1R32P-201ENST00000452234 905 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AL354872.1-201ENST00000456361 967 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 RPS26P11-201ENST00000463445 348 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 RPS26P6-201ENST00000475156 348 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AC021220.1-201ENST00000507445 630 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AC093325.1-201ENST00000508378 326 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 AC116353.3-201ENST00000511215 249 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 OR10J9P-201ENST00000511932 987 ntBASIC6.08□□□□□ -1.44
SEC61A2Q9H9S3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms