Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 OOSP1P2-201ENST00000579644 351 ntBASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 MIR4260-201ENST00000583107 67 ntBASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 AL096712.1-201ENST00000614561 159 ntBASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 AC129915.3-201ENST00000634128 948 ntBASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 AC083837.1-201ENST00000565297 2994 ntBASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCSER1Q9C0I3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 RNA5SP514-201ENST00000363717 111 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 MIR130A-201ENST00000385274 89 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AL035660.1-201ENST00000422041 222 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 KCTD9P1-201ENST00000430462 1167 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AC126120.1-201ENST00000431082 470 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AL590399.4-201ENST00000436561 601 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AC073610.1-201ENST00000489971 396 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AC021146.10-201ENST00000515628 706 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 IGKV2-19-201ENST00000518132 283 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 RPL12P48-201ENST00000605620 304 ntBASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.47□□□□□ -1.37
CCSER1Q9C0I3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 AL355834.1-201ENST00000556602 3965 ntBASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
CCSER1Q9C0I3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 OR7E25P-201ENST00000344844 931 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 HMGN1P20-201ENST00000411849 300 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 NIFKP3-201ENST00000417799 865 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 BX323845.3-201ENST00000428215 527 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 PCBP2P1-201ENST00000437262 977 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 AC084754.1-201ENST00000463466 464 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 RPL12P24-201ENST00000474907 486 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 RN7SL570P-201ENST00000484405 292 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 RPS7P6-201ENST00000485777 579 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 AC021733.2-201ENST00000518830 497 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 AC136777.2-201ENST00000522979 358 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 AC068305.2-201ENST00000550567 1205 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 AC138907.8-201ENST00000623981 2256 ntBASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCSER1Q9C0I3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCSER1Q9C0I3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms