Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MED28P3-201ENST00000444288 531 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 OR2AF1P-201ENST00000454899 889 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC018638.3-201ENST00000461273 132 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC009120.1-201ENST00000493458 473 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 SEPT10P1-201ENST00000517342 1162 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 PCNAP4-201ENST00000532690 730 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC005726.4-201ENST00000582858 458 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC090236.2-201ENST00000587933 1101 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 MIR6793-201ENST00000612376 63 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 ADAM24P-201ENST00000398655 2101 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 RNA5SP433-201ENST00000364491 114 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 DEFA9P-201ENST00000433042 285 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 OR7E116P-201ENST00000448529 957 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 CFL1P4-201ENST00000451536 498 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 RPS17P15-201ENST00000475609 349 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 OR7E157P-201ENST00000494376 911 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AP004609.2-201ENST00000532177 190 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 DPPA2P4-201ENST00000563717 878 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 HSPD1P7-201ENST00000447985 1686 ntBASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RSPO3Q9BXY4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AL137058.3-201ENST00000624531 3099 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 COX6B1P3-201ENST00000312310 260 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 NENFP1-201ENST00000419476 466 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 RNGTTP1-201ENST00000420965 728 ntBASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.26□□□□□ -1.57
RSPO3Q9BXY4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms