Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 HSPD1P7-201ENST00000447985 1686 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AL360270.2-201ENST00000562952 5985 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AP001029.2-203ENST00000589795 4910 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 RNFT1P3-201ENST00000340898 1052 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AL121886.1-201ENST00000358609 435 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 U3.28-201ENST00000391249 210 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC016739.1-201ENST00000405359 345 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC019205.1-201ENST00000421830 730 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 OR5W1P-201ENST00000423705 938 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AL356121.1-201ENST00000442911 156 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC005077.1-201ENST00000449226 375 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 IGKV3D-25-201ENST00000519599 235 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 EIF4EP5-201ENST00000528228 640 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC092332.1-201ENST00000563684 829 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 MIR4776-2-201ENST00000580204 80 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC018809.2-201ENST00000602436 3823 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 NANOGP3-201ENST00000605855 286 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 GVINP1-202ENST00000531871 7271 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 BX284613.1-201ENST00000452221 1641 ntBASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.79□□□□□ -1.64
HDHD3Q9BSH5 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 MIR191-201ENST00000384873 92 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 TMEM183AP1-205ENST00000432739 290 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AL359265.1-201ENST00000440296 795 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 REG1CP-206ENST00000447469 496 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 OR52I1-201ENST00000450052 1050 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AC108751.3-201ENST00000461814 1020 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 RPS23P2-201ENST00000463671 415 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 SNRPCP3-201ENST00000474888 476 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AC099521.1-201ENST00000482557 334 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 CR383656.1-201ENST00000484916 377 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 MRPS5P3-201ENST00000515577 166 ntBASIC4.78□□□□□ -1.64
HDHD3Q9BSH5 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms