Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 AC087672.1-201ENST00000479876 766 ntBASIC8.19□□□□□ -1.1
SIN3AQ96ST3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 SCARNA9-201ENST00000530422 353 ntBASIC8.19□□□□□ -1.1
SIN3AQ96ST3 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 SNORD95-201ENST00000579879 68 ntBASIC8.19□□□□□ -1.1
SIN3AQ96ST3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 AC126175.1-201ENST00000617041 758 ntBASIC8.19□□□□□ -1.1
SIN3AQ96ST3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SIN3AQ96ST3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AC006206.1-201ENST00000544842 3387 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AL049634.1-201ENST00000453770 1720 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 RNA5SP46-201ENST00000362370 120 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AL390119.1-201ENST00000440329 312 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AC019185.1-201ENST00000442718 389 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AL450023.1-201ENST00000450868 751 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AC093719.1-201ENST00000480427 441 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AC025574.2-201ENST00000615621 514 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 CU639417.4-201ENST00000623928 207 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 OR52B5P-204ENST00000641744 3467 ntBASIC8.18□□□□□ -1.1
SIN3AQ96ST3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SIN3AQ96ST3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 SNORA16A-201ENST00000384342 137 ntBASIC8.17□□□□□ -1.1
SIN3AQ96ST3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 NAP1L4P2-201ENST00000425958 899 ntBASIC8.17□□□□□ -1.1
SIN3AQ96ST3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 VDAC2P4-201ENST00000452925 711 ntBASIC8.17□□□□□ -1.1
SIN3AQ96ST3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 MIR4505-201ENST00000582238 73 ntBASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AC090607.5-201ENST00000615692 224 ntBASIC8.17□□□□□ -1.1
SIN3AQ96ST3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AL390318.1-201ENST00000624564 687 ntBASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AC069542.2-201ENST00000624816 216 ntBASIC8.17□□□□□ -1.1
SIN3AQ96ST3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 AC004076.2-201ENST00000620532 3323 ntBASIC8.17□□□□□ -1.1
SIN3AQ96ST3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SIN3AQ96ST3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 RN7SKP69-201ENST00000365390 305 ntBASIC8.16□□□□□ -1.1
SIN3AQ96ST3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.16□□□□□ -1.1
SIN3AQ96ST3 AL133173.1-201ENST00000423458 397 ntBASIC8.16□□□□□ -1.1
SIN3AQ96ST3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 AL596266.1-201ENST00000448132 400 ntBASIC8.16□□□□□ -1.1
SIN3AQ96ST3 YWHAEP1-201ENST00000453697 763 ntBASIC8.16□□□□□ -1.1
SIN3AQ96ST3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 RPS27AP2-201ENST00000457576 465 ntBASIC8.16□□□□□ -1.1
SIN3AQ96ST3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 UGT2B24P-201ENST00000514441 1597 ntBASIC8.16□□□□□ -1.1
SIN3AQ96ST3 GAPDHP62-201ENST00000515313 990 ntBASIC8.16□□□□□ -1.1
SIN3AQ96ST3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC8.16□□□□□ -1.1
SIN3AQ96ST3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms