Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CYP4F32P-201ENST00000426492 504 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AL391987.1-201ENST00000441025 200 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 TRY2P-201ENST00000448860 689 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 OR52Y1P-201ENST00000452418 828 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 RPL12P26-201ENST00000452430 487 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 RPL7P45-201ENST00000455851 743 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC005410.1-202ENST00000460347 485 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC104109.1-201ENST00000498563 436 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC018797.1-201ENST00000510791 255 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC092593.2-201ENST00000513866 913 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 SETP1-201ENST00000556014 845 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AL390726.5-202ENST00000564800 256 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC095057.3-201ENST00000567102 1157 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC011445.2-201ENST00000599274 173 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC005034.4-201ENST00000603612 899 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC091931.1-201ENST00000623488 728 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC010608.2-201ENST00000624830 470 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC183089.2-201ENST00000637931 916 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 DDX18P5-201ENST00000534547 1306 ntBASIC7.65□□□□□ -1.19
SYNGAP1Q96PV0 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.65□□□□□ -1.19
SYNGAP1Q96PV0 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.65□□□□□ -1.19
SYNGAP1Q96PV0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
SYNGAP1Q96PV0 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SYNGAP1Q96PV0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC104837.1-201ENST00000444644 1587 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 SNORA70.3-201ENST00000365075 132 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AL512422.1-201ENST00000407033 553 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 TATDN1P1-201ENST00000414123 891 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AL445183.3-201ENST00000414168 502 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 RPL30P16-201ENST00000419341 429 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC009500.1-201ENST00000420684 583 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AL445567.1-201ENST00000439121 144 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 RPL31P20-201ENST00000449593 360 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 RPS27AP8-201ENST00000452665 445 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 MTND3P7-201ENST00000474435 343 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AP002884.1-201ENST00000479691 655 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC005017.1-201ENST00000482002 490 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 RPL21P47-201ENST00000483696 477 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 RN7SL362P-201ENST00000494228 267 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC113367.2-201ENST00000505749 160 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 SUMO2P7-201ENST00000511179 285 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 MTND3P5-201ENST00000512798 333 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC010546.1-201ENST00000569391 485 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 MIR4700-201ENST00000578311 74 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 CTSLP2-201ENST00000580501 394 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC245052.7-201ENST00000601161 359 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AP001596.2-201ENST00000608410 312 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AL589743.6-201ENST00000611025 117 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC090617.9-201ENST00000623751 147 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC005609.4-201ENST00000625071 447 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 AC103706.2-201ENST00000638080 240 ntBASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNGAP1Q96PV0 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms