Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC023490.2-201ENST00000359859 470 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 OR5H15-201ENST00000383696 930 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 RN7SKP62-201ENST00000384539 329 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL590084.2-201ENST00000401481 382 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL136100.1-201ENST00000407696 330 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL356968.2-201ENST00000412769 1257 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 RPS26P13-201ENST00000419030 330 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 YWHAZP7-201ENST00000436906 631 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC002486.2-201ENST00000447806 590 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC236972.4-201ENST00000458091 963 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 RN7SKP198-201ENST00000459286 306 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC026348.1-201ENST00000462549 1053 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 RPS4XP23-201ENST00000487801 237 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC093325.1-201ENST00000508378 326 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 RNU6-1334P-201ENST00000516032 105 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC013701.1-201ENST00000522657 465 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 DUXAP1-201ENST00000556632 463 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 VN1R88P-201ENST00000596787 292 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 RPS27AP19-201ENST00000597285 458 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL356986.1-201ENST00000604085 341 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC092354.2-201ENST00000607786 514 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC018690.1-201ENST00000608144 626 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 PTCHD3P1-201ENST00000612350 537 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC005332.10-201ENST00000612725 619 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL158063.1-201ENST00000615349 536 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AF246928.1-201ENST00000623768 87 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL359740.1-201ENST00000624340 592 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC007494.3-201ENST00000624660 743 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 MTCO1P18-201ENST00000455518 1419 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC129502.1-201ENST00000623261 1654 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AL359263.1-201ENST00000441188 2796 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC092821.2-201ENST00000545710 2042 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 SNORA40.2-201ENST00000390847 128 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MIR1204-201ENST00000408388 67 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MTND4LP11-201ENST00000422184 280 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MTCYBP5-201ENST00000423752 1135 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 EMC3-AS1-205ENST00000438698 534 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 MTND2P20-201ENST00000440805 661 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 TPTE2P6-202ENST00000445572 1007 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 HMGB1P48-201ENST00000446155 598 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AL157827.1-201ENST00000447622 132 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AC009244.1-201ENST00000450566 258 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 AL109741.2-201ENST00000455561 343 ntBASIC6.54□□□□□ -1.36
PTCHD1Q96NR3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms