Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC097063.1-201ENST00000426714 1797 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 OR4K17-201ENST00000315543 1032 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 SNORD51.1-201ENST00000365405 77 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 RNU1-84P-201ENST00000365447 164 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AL035405.1-201ENST00000400795 710 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 MTND4P24-201ENST00000424002 397 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 XKRY2-201ENST00000442362 1093 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 CYCSP51-201ENST00000443545 318 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 RN7SL39P-201ENST00000462264 297 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 SLC25A51P1-201ENST00000468432 871 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC090543.1-201ENST00000492168 485 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC010468.3-201ENST00000508225 458 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC108157.1-201ENST00000510511 539 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 RNU6-889P-201ENST00000517189 103 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 ZNF92P2-201ENST00000600543 1059 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AP001267.4-201ENST00000602598 545 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC135178.6-201ENST00000605314 398 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC024589.2-201ENST00000605642 1294 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 SNORD96A-201ENST00000606577 79 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 OR51C1P-201ENST00000608504 942 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC114546.4-201ENST00000624413 369 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 SAMM50P1-201ENST00000455403 1399 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AL137141.1-201ENST00000624622 4836 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC125336.1-201ENST00000508893 2827 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AC005702.3-201ENST00000585345 1447 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 AL591135.1-201ENST00000401578 5914 ntBASIC6.14□□□□□ -1.43
VPS50Q96JG6 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VPS50Q96JG6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.14□□□□□ -1.43
VPS50Q96JG6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 CASC19-260ENST00000641828 2001 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 RNA5SP232-201ENST00000364144 119 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 VN1R37P-201ENST00000419096 748 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 RNF19BPX-201ENST00000426224 625 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 IGLV3-4-201ENST00000432300 244 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 RPL5P10-201ENST00000445207 894 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 VN1R38P-201ENST00000450265 887 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 RN7SL552P-201ENST00000462094 276 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC104849.1-201ENST00000462623 405 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC078857.1-201ENST00000469870 667 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC016687.1-201ENST00000482574 353 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 HAUS1P1-201ENST00000505275 832 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 SCARNA5-201ENST00000516201 276 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 SCARNA1-201ENST00000517138 166 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms