Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MRPS21P8-201ENST00000569196 235 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC126365.2-201ENST00000580630 379 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AP006248.3-201ENST00000623580 594 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 AL357140.4-201ENST00000636827 412 ntBASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP3Q96JB5 GTF2IP4-201ENST00000453092 2054 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RNA5SP232-201ENST00000364144 119 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RAB5CP1-201ENST00000395972 580 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RNA5SP251-201ENST00000410614 137 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RPL35AP31-201ENST00000418340 337 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AL354692.1-201ENST00000423044 315 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC130360.1-201ENST00000425489 1117 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 GAPDHP59-201ENST00000435908 267 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RPL23AP60-201ENST00000450011 454 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC002553.3-201ENST00000453002 341 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AL355032.1-201ENST00000472981 438 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC124945.1-201ENST00000485133 188 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RPL9P15-201ENST00000491096 532 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RNU6-491P-201ENST00000516099 110 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC130365.2-201ENST00000525882 1201 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 MIR3154-201ENST00000577829 84 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 MIR132-201ENST00000591554 101 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AP003117.1-201ENST00000602771 554 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC005776.1-201ENST00000603164 290 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC004890.3-201ENST00000605566 1095 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 uc_338.31-201ENST00000615595 186 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 MIR6721-201ENST00000617181 87 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 U1.34-201ENST00000618578 162 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AC073488.6-201ENST00000632293 754 ntBASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP3Q96JB5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 RNA5SP279-201ENST00000365513 117 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 MIR421-201ENST00000365696 85 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 PTGES3P2-201ENST00000407942 482 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 RN7SKP108-201ENST00000411367 328 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 AL035422.1-201ENST00000414193 397 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 CLNS1AP1-201ENST00000435954 682 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 HMGB1P7-201ENST00000450921 612 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 AC090543.1-201ENST00000492168 485 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 CYP4F27P-201ENST00000514557 494 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 RN7SKP248-201ENST00000516278 305 ntBASIC6.85□□□□□ -1.31
CDK5RAP3Q96JB5 OR56A7P-201ENST00000524865 941 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms