Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 BTBD10P1-201ENST00000549824 1352 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 RNA5SP346-201ENST00000363541 121 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 THEM7P-201ENST00000419556 672 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 FAM183DP-201ENST00000421987 399 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC099782.1-201ENST00000425889 474 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 OR3D1P-201ENST00000438288 955 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 ARMC4P1-201ENST00000438905 707 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AL133351.3-201ENST00000454998 193 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AP002453.1-201ENST00000492327 668 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC116917.1-201ENST00000520558 305 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 OR4A41P-201ENST00000533053 928 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC127381.1-201ENST00000555979 939 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC121758.1-202ENST00000556917 658 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 RPSAP75-201ENST00000605848 301 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AL021368.3-201ENST00000607119 578 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 AC005828.7-201ENST00000607331 556 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 TMEM30CP-203ENST00000637814 1035 ntBASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMEM53Q6P2H8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AOX3P-204ENST00000491025 2107 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC092692.1-201ENST00000623625 2595 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 RN7SKP145-201ENST00000363291 303 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 SNORD1C-201ENST00000363315 78 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 RNU1-49P-201ENST00000363468 159 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AL157702.1-201ENST00000398764 426 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 RNA5SP487-201ENST00000410186 122 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC013268.2-201ENST00000420753 337 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 NMD3P2-201ENST00000421815 761 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 RPS3AP38-201ENST00000435889 763 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 CLNS1AP1-201ENST00000435954 682 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 TCEA1P3-201ENST00000443005 880 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC073072.2-201ENST00000447425 348 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 HIGD1AP16-201ENST00000450986 258 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AP000942.1-201ENST00000463969 747 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 OR7E22P-201ENST00000478335 1035 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC095052.1-201ENST00000509955 863 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 GUSBP9-201ENST00000510138 584 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 GAPDHP71-201ENST00000511530 1003 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 Y_RNA.710-201ENST00000516975 110 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC092865.1-201ENST00000544395 1023 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 MIR3936-201ENST00000584304 110 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 NPIPB1P-202ENST00000588786 828 ntBASIC5.44□□□□□ -1.54
TMEM53Q6P2H8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms