Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.32□□□□□ -1.56
EFNB3Q15768 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.32□□□□□ -1.56
EFNB3Q15768 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EFNB3Q15768 GTF2IP4-201ENST00000453092 2054 ntBASIC5.32□□□□□ -1.56
EFNB3Q15768 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
EFNB3Q15768 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AL359976.1-201ENST00000418655 3528 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.31□□□□□ -1.56
EFNB3Q15768 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.31□□□□□ -1.56
EFNB3Q15768 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.31□□□□□ -1.56
EFNB3Q15768 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC006213.6-201ENST00000623722 4179 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 FUNDC2P3-201ENST00000334716 533 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 SNORA21-201ENST00000362423 132 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 SNORA70H-201ENST00000383910 135 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 SNORA70J-201ENST00000384182 135 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC004386.1-201ENST00000393214 761 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AP003170.5-201ENST00000397185 335 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 SNORA77.2-201ENST00000408571 112 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 CBX1P3-201ENST00000413296 527 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.31□□□□□ -1.56
EFNB3Q15768 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 UBE2D3P3-201ENST00000426992 425 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC079807.1-201ENST00000429993 481 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.31□□□□□ -1.56
EFNB3Q15768 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.31□□□□□ -1.56
EFNB3Q15768 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC010374.2-201ENST00000512933 535 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC016550.3-201ENST00000515706 767 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 RNU6-1102P-201ENST00000516149 96 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 RNA5SP434-201ENST00000516647 121 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 SCARNA1-201ENST00000517138 166 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 RPA2P3-201ENST00000533268 770 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC090115.2-201ENST00000548060 883 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.31□□□□□ -1.56
EFNB3Q15768 CYCSP38-201ENST00000559840 322 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC233266.2-201ENST00000567067 528 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.31□□□□□ -1.56
EFNB3Q15768 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.31□□□□□ -1.56
EFNB3Q15768 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.31□□□□□ -1.56
EFNB3Q15768 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.31□□□□□ -1.56
EFNB3Q15768 MIR6861-201ENST00000618657 64 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC022400.9-201ENST00000623633 273 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 MAPK10-350ENST00000641777 965 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 LYARP1-201ENST00000436977 1501 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 AC006511.3-201ENST00000624929 1783 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
EFNB3Q15768 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFNB3Q15768 GUCY1B2-204ENST00000531898 1979 ntBASIC5.31□□□□□ -1.56
EFNB3Q15768 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
EFNB3Q15768 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.31□□□□□ -1.56
EFNB3Q15768 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
EFNB3Q15768 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.3□□□□□ -1.56
EFNB3Q15768 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
EFNB3Q15768 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
EFNB3Q15768 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
EFNB3Q15768 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 RNA5SP110-201ENST00000362638 115 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 RN7SKP15-201ENST00000364742 309 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 RNU6-650P-201ENST00000365658 111 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
EFNB3Q15768 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
EFNB3Q15768 AL445238.1-204ENST00000400311 463 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 RNA5SP156-201ENST00000410250 110 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
EFNB3Q15768 CYP4F30P-202ENST00000420048 405 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.3□□□□□ -1.56
EFNB3Q15768 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.3□□□□□ -1.56
EFNB3Q15768 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.3□□□□□ -1.56
EFNB3Q15768 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.3□□□□□ -1.56
EFNB3Q15768 AC144530.1-201ENST00000452862 555 ntBASIC5.3□□□□□ -1.56
EFNB3Q15768 AC023194.2-201ENST00000465398 406 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms