Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 RNU6-697P-201ENST00000363348 107 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 MIR191-201ENST00000384873 92 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AL590084.2-201ENST00000401481 382 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 ERHP2-201ENST00000402323 299 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX4Q06945 AK4P4-201ENST00000419465 646 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 MTCO2P34-201ENST00000421994 607 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC128677.1-201ENST00000436016 442 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC092601.1-201ENST00000444526 383 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 UBE2V1P7-201ENST00000446395 340 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.3□□□□□ -1.24
SOX4Q06945 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC116353.2-201ENST00000505332 712 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC021220.1-201ENST00000507445 630 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 CR383658.1-201ENST00000514609 734 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC022447.1-201ENST00000515358 464 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC138517.1-201ENST00000515724 568 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 RNA5SP303-201ENST00000516192 130 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 NDUFA5P2-201ENST00000519723 344 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX4Q06945 OR4A40P-201ENST00000533878 948 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX4Q06945 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC005519.1-201ENST00000554490 601 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX4Q06945 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC093524.1-201ENST00000564266 1094 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX4Q06945 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 AL031281.1-201ENST00000604049 488 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 OR2BH1P-201ENST00000608850 864 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC009237.15-201ENST00000610252 501 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC068726.1-201ENST00000610993 341 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AL359513.1-201ENST00000614364 557 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 MIR6503-201ENST00000622884 86 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 AC034229.6-201ENST00000623704 224 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 OR11H2-202ENST00000641517 1085 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 MRPS17P1-201ENST00000596009 3130 ntBASIC7.3□□□□□ -1.24
SOX4Q06945 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX4Q06945 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX4Q06945 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SOX4Q06945 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX4Q06945 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.29□□□□□ -1.24
SOX4Q06945 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
SOX4Q06945 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX4Q06945 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX4Q06945 AC009166.2-201ENST00000624410 2833 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX4Q06945 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.29□□□□□ -1.24
SOX4Q06945 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.29□□□□□ -1.24
SOX4Q06945 CR848007.1-201ENST00000442354 1699 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 AC096992.2-201ENST00000609553 1684 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 CCAT2-201ENST00000630920 1752 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
SOX4Q06945 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.29□□□□□ -1.24
SOX4Q06945 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX4Q06945 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX4Q06945 RNA5SP85-201ENST00000365378 119 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 MIR199B-201ENST00000384849 110 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 MIR1204-201ENST00000408388 67 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.29□□□□□ -1.24
SOX4Q06945 RN7SKP146-201ENST00000410242 334 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 MTND1P21-201ENST00000412991 285 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 SEPT7P8-201ENST00000413308 775 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 NPM1P11-201ENST00000417106 855 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 EIF4A1P1-201ENST00000420241 934 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 GAPDHP57-201ENST00000424400 585 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX4Q06945 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.29□□□□□ -1.24
SOX4Q06945 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 RPS27P5-201ENST00000444247 244 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX4Q06945 AKR1D1P1-201ENST00000457236 936 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 RPL9P33-201ENST00000484311 566 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX4Q06945 AC113430.1-201ENST00000506872 718 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX4Q06945 RNA5SP318-201ENST00000516352 92 ntBASIC7.29□□□□□ -1.24
SOX4Q06945 AC116917.1-201ENST00000520558 305 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms