Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 DPPA2P4-201ENST00000563717 878 ntBASIC4.85□□□□□ -1.63
LMO4P61968 MRPS21P9-201ENST00000571150 257 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.85□□□□□ -1.63
LMO4P61968 MIR4260-201ENST00000583107 67 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.85□□□□□ -1.63
LMO4P61968 AC104695.2-201ENST00000605056 775 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC096586.2-201ENST00000610260 441 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AL512624.1-201ENST00000613638 469 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AP005212.4-201ENST00000614206 710 ntBASIC4.85□□□□□ -1.63
LMO4P61968 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 AL445670.1-201ENST00000618889 801 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AL353684.1-201ENST00000622677 1120 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AL691477.1-201ENST00000624398 162 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LMO4P61968 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LMO4P61968 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LMO4P61968 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.85□□□□□ -1.63
LMO4P61968 AC005034.3-201ENST00000604845 1747 ntBASIC4.85□□□□□ -1.63
LMO4P61968 AC006511.3-201ENST00000624929 1783 ntBASIC4.85□□□□□ -1.63
LMO4P61968 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.85□□□□□ -1.63
LMO4P61968 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
LMO4P61968 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC4.85□□□□□ -1.63
LMO4P61968 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMO4P61968 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LMO4P61968 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC4.84□□□□□ -1.63
LMO4P61968 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC4.84□□□□□ -1.63
LMO4P61968 AL121768.1-201ENST00000613917 2544 ntBASIC4.84□□□□□ -1.63
LMO4P61968 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LMO4P61968 AC130360.2-201ENST00000533477 1556 ntBASIC4.84□□□□□ -1.63
LMO4P61968 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 AC083899.2-201ENST00000423285 1376 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.84□□□□□ -1.63
LMO4P61968 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO4P61968 OR2AT2P-201ENST00000413438 905 ntBASIC4.84□□□□□ -1.63
LMO4P61968 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.84□□□□□ -1.63
LMO4P61968 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.84□□□□□ -1.63
LMO4P61968 AL022331.1-201ENST00000429025 477 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.84□□□□□ -1.63
LMO4P61968 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO4P61968 AC073909.1-201ENST00000447112 999 ntBASIC4.84□□□□□ -1.63
LMO4P61968 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO4P61968 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO4P61968 AL603882.1-201ENST00000463059 681 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC115223.1-201ENST00000466377 870 ntBASIC4.84□□□□□ -1.63
LMO4P61968 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.84□□□□□ -1.63
LMO4P61968 RN7SL177P-201ENST00000476596 299 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC022215.1-201ENST00000481770 362 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO4P61968 RN7SL466P-201ENST00000497546 295 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC023818.1-201ENST00000498379 384 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC109481.1-201ENST00000509173 282 ntBASIC4.84□□□□□ -1.63
LMO4P61968 ATP5LP3-201ENST00000514223 304 ntBASIC4.84□□□□□ -1.63
LMO4P61968 RNA5SP362-201ENST00000516048 118 ntBASIC4.84□□□□□ -1.63
LMO4P61968 RNU6-615P-201ENST00000516065 106 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO4P61968 HMGB1P42-201ENST00000532126 553 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC090022.1-201ENST00000546569 311 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC125612.1-201ENST00000547580 377 ntBASIC4.84□□□□□ -1.63
LMO4P61968 DPPA3P2-201ENST00000553589 478 ntBASIC4.84□□□□□ -1.63
LMO4P61968 IGBP1P1-201ENST00000554337 1009 ntBASIC4.84□□□□□ -1.63
LMO4P61968 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.84□□□□□ -1.63
LMO4P61968 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO4P61968 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO4P61968 MIR132-201ENST00000591554 101 ntBASIC4.84□□□□□ -1.63
LMO4P61968 AC016911.1-201ENST00000613297 452 ntBASIC4.84□□□□□ -1.63
LMO4P61968 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.84□□□□□ -1.63
LMO4P61968 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC4.84□□□□□ -1.63
LMO4P61968 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO4P61968 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.84□□□□□ -1.63
LMO4P61968 AC061975.7-201ENST00000592016 2692 ntBASIC4.84□□□□□ -1.63
LMO4P61968 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LMO4P61968 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LMO4P61968 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LMO4P61968 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LMO4P61968 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LMO4P61968 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LMO4P61968 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.84□□□□□ -1.64
LMO4P61968 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC4.84□□□□□ -1.64
LMO4P61968 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
LMO4P61968 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
LMO4P61968 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LMO4P61968 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LMO4P61968 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms