Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN6P56747 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.67□□□□□ -1.5
CLDN6P56747 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 PABPC1P6-201ENST00000445594 1829 ntBASIC5.67□□□□□ -1.5
CLDN6P56747 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CLDN6P56747 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLDN6P56747 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN6P56747 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN6P56747 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLDN6P56747 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN6P56747 RNA5SP443-201ENST00000363083 132 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 SNORD8-201ENST00000363915 110 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN6P56747 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN6P56747 AL391422.1-201ENST00000402155 436 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN6P56747 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN6P56747 AK4P4-201ENST00000419465 646 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.66□□□□□ -1.5
CLDN6P56747 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN6P56747 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.66□□□□□ -1.5
CLDN6P56747 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 AC093763.2-201ENST00000505334 1223 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN6P56747 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.66□□□□□ -1.5
CLDN6P56747 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLDN6P56747 AC093524.1-201ENST00000564266 1094 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 TXNP4-201ENST00000575018 310 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN6P56747 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.66□□□□□ -1.5
CLDN6P56747 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.66□□□□□ -1.5
CLDN6P56747 AC090510.2-201ENST00000617465 629 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN6P56747 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN6P56747 ABCA11P-202ENST00000504019 2110 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 YES1P1-201ENST00000418510 1628 ntBASIC5.66□□□□□ -1.5
CLDN6P56747 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN6P56747 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.66□□□□□ -1.5
CLDN6P56747 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN6P56747 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.66□□□□□ -1.5
CLDN6P56747 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLDN6P56747 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN6P56747 AC114786.1-201ENST00000512892 1415 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN6P56747 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN6P56747 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN6P56747 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CLDN6P56747 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN6P56747 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 RNU6-316P-201ENST00000391027 107 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 RMRPP5-201ENST00000411156 267 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN6P56747 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN6P56747 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN6P56747 RPS27AP3-201ENST00000453803 454 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 AC091685.2-201ENST00000454924 864 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 AC104164.1-201ENST00000460282 590 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 RN7SL165P-201ENST00000477476 291 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 OR7E157P-201ENST00000494376 911 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN6P56747 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN6P56747 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN6P56747 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN6P56747 OR10G5P-201ENST00000532733 358 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN6P56747 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.65□□□□□ -1.5
CLDN6P56747 GARSP1-201ENST00000570895 719 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN6P56747 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 Mico1.1-201ENST00000611698 204 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 MIR7155-201ENST00000615925 56 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.65□□□□□ -1.5
CLDN6P56747 AC022726.2-201ENST00000634673 547 ntBASIC5.65□□□□□ -1.5
CLDN6P56747 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CLDN6P56747 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLDN6P56747 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
CLDN6P56747 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.65□□□□□ -1.51
CLDN6P56747 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.65□□□□□ -1.51
CLDN6P56747 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN6P56747 NR1H5P-201ENST00000452683 1377 ntBASIC5.65□□□□□ -1.51
CLDN6P56747 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLDN6P56747 AC007342.5-201ENST00000571340 2142 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms