Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH12P55289 RNU2-45P-201ENST00000516068 187 ntBASIC5.6□□□□□ -1.51
CDH12P55289 snoU109.5-201ENST00000516231 132 ntBASIC5.6□□□□□ -1.51
CDH12P55289 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH12P55289 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 AC079148.1-201ENST00000565944 819 ntBASIC5.6□□□□□ -1.51
CDH12P55289 MIR3157-201ENST00000578688 85 ntBASIC5.6□□□□□ -1.51
CDH12P55289 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH12P55289 RN7SL66P-201ENST00000582099 264 ntBASIC5.6□□□□□ -1.51
CDH12P55289 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH12P55289 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH12P55289 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH12P55289 AL360012.1-201ENST00000602813 131 ntBASIC5.6□□□□□ -1.51
CDH12P55289 AC012368.3-201ENST00000604190 219 ntBASIC5.6□□□□□ -1.51
CDH12P55289 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH12P55289 AC018645.2-201ENST00000609151 472 ntBASIC5.6□□□□□ -1.51
CDH12P55289 AL122023.1-201ENST00000622847 530 ntBASIC5.6□□□□□ -1.51
CDH12P55289 AP001153.1-201ENST00000641024 338 ntBASIC5.6□□□□□ -1.51
CDH12P55289 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CDH12P55289 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH12P55289 AC011416.1-201ENST00000514947 1732 ntBASIC5.6□□□□□ -1.51
CDH12P55289 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH12P55289 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 HSPA8P19-201ENST00000505359 1517 ntBASIC5.59□□□□□ -1.51
CDH12P55289 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH12P55289 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH12P55289 AC139426.3-201ENST00000605648 2059 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH12P55289 AC025470.1-201ENST00000510053 2032 ntBASIC5.59□□□□□ -1.51
CDH12P55289 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 SNORD51.1-201ENST00000365405 77 ntBASIC5.59□□□□□ -1.51
CDH12P55289 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH12P55289 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH12P55289 RSL24D1P1-201ENST00000404972 493 ntBASIC5.59□□□□□ -1.51
CDH12P55289 RN7SKP166-201ENST00000410812 305 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH12P55289 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH12P55289 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH12P55289 AC013403.1-201ENST00000436954 263 ntBASIC5.59□□□□□ -1.51
CDH12P55289 RAB9AP5-201ENST00000437794 597 ntBASIC5.59□□□□□ -1.51
CDH12P55289 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AC245291.3-201ENST00000443400 292 ntBASIC5.59□□□□□ -1.51
CDH12P55289 RAB9AP2-201ENST00000443911 597 ntBASIC5.59□□□□□ -1.51
CDH12P55289 FCF1P6-201ENST00000456841 595 ntBASIC5.59□□□□□ -1.51
CDH12P55289 ACA64.4-201ENST00000459070 127 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AC016687.1-201ENST00000482574 353 ntBASIC5.59□□□□□ -1.51
CDH12P55289 RPL34P33-201ENST00000486062 334 ntBASIC5.59□□□□□ -1.51
CDH12P55289 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH12P55289 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH12P55289 RN7SKP288-201ENST00000516227 268 ntBASIC5.59□□□□□ -1.51
CDH12P55289 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH12P55289 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.59□□□□□ -1.51
CDH12P55289 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH12P55289 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH12P55289 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH12P55289 AP001496.3-201ENST00000580230 913 ntBASIC5.59□□□□□ -1.51
CDH12P55289 MIR4760-201ENST00000585040 80 ntBASIC5.59□□□□□ -1.51
CDH12P55289 OR1AB1P-201ENST00000585564 761 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH12P55289 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH12P55289 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH12P55289 AC017076.1-201ENST00000607613 578 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AC034229.4-201ENST00000607861 441 ntBASIC5.59□□□□□ -1.51
CDH12P55289 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH12P55289 AL356608.1-201ENST00000610034 820 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AC104763.3-201ENST00000613765 618 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AL163051.2-201ENST00000618976 735 ntBASIC5.59□□□□□ -1.51
CDH12P55289 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH12P55289 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH12P55289 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH12P55289 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH12P55289 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH12P55289 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH12P55289 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.59□□□□□ -1.52
CDH12P55289 AC130360.2-201ENST00000533477 1556 ntBASIC5.59□□□□□ -1.52
CDH12P55289 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH12P55289 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH12P55289 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms